RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF197O14709 1029 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 IL18RAPO95256 599 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 LDHAP00338 332 aaKnown RBP9.45□□□□□ -0.9
USP6NL-203ENST00000443016 ADRB2P07550 413 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 PAX3P23760 479 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 SYKP43405 635 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 AARSP49588 968 aaKnown RBP eCLIP9.45□□□□□ -0.9
USP6NL-203ENST00000443016 MRE11P49959 708 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 CASP5P51878 434 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 GPC5P78333 572 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 ASIC1P78348 528 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 TFAMQ00059 246 aaKnown RBP9.45□□□□□ -0.9
USP6NL-203ENST00000443016 PHLDB3Q6NSJ2 640 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 SHC4Q6S5L8 630 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 METTL23Q86XA0 190 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 RTP3Q9BQQ7 232 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 CUEDC2Q9H467 287 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 SLITRK6Q9H5Y7 841 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 ARHGEF3Q9NR81 526 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 GDE1Q9NZC3 331 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 USP25Q9UHP3 1055 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 HOOK1Q9UJC3 728 aaKnown RBP9.45□□□□□ -0.9
USP6NL-203ENST00000443016 MAFFQ9ULX9 164 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 A0A1B0GVL5 298 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 GALR2O43603 387 aaPredicted RBP9.45□□□□□ -0.9
USP6NL-203ENST00000443016 PRPF6O94906 941 aaKnown RBP9.45□□□□□ -0.9
USP6NL-203ENST00000443016 AOC1P19801 751 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 TYMPP19971 482 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 ALDH1A3P47895 512 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 TAF6P49848 677 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 DUSP4Q13115 394 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 SLC5A9Q2M3M2 681 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 GPATCH11Q8N954 259 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 KXD1Q9BQD3 176 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 ASAH2Q9NR71 780 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 FAM86C1Q9NVL1 165 aa9.45□□□□□ -0.9
USP6NL-203ENST00000443016 RBAKQ9NYW8 714 aaPredicted RBP9.45□□□□□ -0.9
USP6NL-203ENST00000443016 FAM237AA0A1B0GTK4 181 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 KRBA1A5PL33 1030 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 GOLGA8IPA6NC78 632 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 GOLGA8JA6NMD2 632 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 PIRO00625 290 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 SPTLC1O15269 473 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 POLR2DO15514 142 aaKnown RBP9.44□□□□□ -0.9
USP6NL-203ENST00000443016 PI15O43692 258 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 MYL4P12829 197 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 POU5F1Q01860 360 aaKnown RBP9.44□□□□□ -0.9
USP6NL-203ENST00000443016 GPR17Q13304 367 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CWF19L1Q69YN2 538 aaKnown RBP9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CRELD2Q6UXH1 353 aaPredicted RBP9.44□□□□□ -0.9
USP6NL-203ENST00000443016 NT5DC4Q86YG4 428 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 THEM5Q8N1Q8 247 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CACTINQ8WUQ7 758 aaKnown RBP9.44□□□□□ -0.9
USP6NL-203ENST00000443016 ANP32EQ9BTT0 268 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 STRA6Q9BX79 667 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 TRIM9Q9C026 710 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 PCIF1Q9H4Z3 704 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 TBC1D17Q9HA65 648 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 DSEQ9UL01 958 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 FRMD3A2A2Y4 597 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 DPYSL4O14531 572 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CYB561D2O14569 222 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 KRT19P08727 400 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 C7P10643 843 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 NPR3P17342 541 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CEBPBP17676 345 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 GARTP22102 1010 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CDR1P51861 262 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 NDUFA8P51970 172 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 EPHB3P54753 998 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 PFKPQ01813 784 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 PLD1Q13393 1074 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CEP57L1Q8IYX8 460 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 ATAD1Q8NBU5 361 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 LEMD2Q8NC56 503 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 HPS3Q969F9 1004 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 TCEAL4Q96EI5 215 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 SHDQ96IW2 340 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 ZNF560Q96MR9 790 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CBWD1Q9BRT8 395 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 FGFBP2Q9BYJ0 223 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 GOLPH3LQ9H4A5 285 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 MAGEF1Q9HAY2 307 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 SLC2A4RGQ9NR83 387 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 KBTBD4Q9NVX7 518 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 CEP72Q9P209 647 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 HPSEQ9Y251 543 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 SLC27A5Q9Y2P5 690 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 YIPF1Q9Y548 306 aa9.44□□□□□ -0.9
USP6NL-203ENST00000443016 FRYLO94915 3013 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 ANO9A1A5B4 782 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 KPNA7A9QM74 516 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 PNPLA4P41247 253 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 MYBPC2Q14324 1141 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 TAF12Q16514 161 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 SV2CQ496J9 727 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 SLC39A12Q504Y0 691 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 BRSK2Q8IWQ3 736 aa9.43□□□□□ -0.9
USP6NL-203ENST00000443016 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 292.3 ms