RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 DUOXA2Q1HG44 320 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 CYP4A22Q5TCH4 519 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 PARM1Q6UWI2 310 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 KRBA2Q6ZNG9 492 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 MTSS1LQ765P7 747 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 WDR49Q8IV35 697 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 PDCL2Q8N4E4 241 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 SLC44A3Q8N4M1 653 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 FGF14Q92915 247 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 NXPE3Q969Y0 559 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 BORCS6Q96GS4 357 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 ZCWPW1Q9H0M4 648 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 ASAH2Q9NR71 780 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 CEP72Q9P209 647 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 CGNQ9P2M7 1197 aaKnown RBP22.67■■□□□ 1.22
CDKN3-204ENST00000442975 L1RE1Q9UN81 338 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 SNX9Q9Y5X1 595 aa22.67■■□□□ 1.22
CDKN3-204ENST00000442975 GOLGA6L4A6NEF3 574 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 HUS1O60921 280 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 MYL4P12829 197 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 TNNI1P19237 187 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 ALDH1A3P47895 512 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 EPHB3P54753 998 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 VCPP55072 806 aaKnown RBP22.66■■□□□ 1.22
CDKN3-204ENST00000442975 PSMD2Q13200 908 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 PSMD6Q15008 389 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 CENPPQ6IPU0 288 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 HS6ST3Q8IZP7 471 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 CXorf38Q8TB03 319 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 TCEAL4Q96EI5 215 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 MCRS1Q96EZ8 462 aa22.66■■□□□ 1.22
CDKN3-204ENST00000442975 TSPY1Q01534 308 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 MYO1EQ12965 1108 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 MGAT5BQ3V5L5 792 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 C12orf56Q8IXR9 622 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 ADGRF2Q8IZF7 708 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 SIX5Q8N196 739 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 FLCNQ8NFG4 579 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 HPDLQ96IR7 371 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 CGRRF1Q99675 332 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 KXD1Q9BQD3 176 aa22.65■■□□□ 1.22
CDKN3-204ENST00000442975 ABI2Q9NYB9 513 aaPredicted RBP22.65■■□□□ 1.22
CDKN3-204ENST00000442975 MTCL1Q9Y4B5 1905 aaKnown RBP22.65■■□□□ 1.22
CDKN3-204ENST00000442975 ANK1P16157 1881 aa22.64■■□□□ 1.22
CDKN3-204ENST00000442975 TSC2P49815 1807 aa22.64■■□□□ 1.22
CDKN3-204ENST00000442975 ZNF197O14709 1029 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 CLSTN1O94985 981 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 ZNF202O95125 648 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 SRFP11831 508 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 CCR2P41597 374 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 PRSS36Q5K4E3 855 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 FAM200AQ8TCP9 573 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 CCDC34Q96HJ3 373 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 RPP25Q9BUL9 199 aaKnown RBP22.64■■□□□ 1.21
CDKN3-204ENST00000442975 AVENQ9NQS1 362 aaPredicted RBP22.64■■□□□ 1.21
CDKN3-204ENST00000442975 GDE1Q9NZC3 331 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 CA14Q9ULX7 337 aa22.64■■□□□ 1.21
CDKN3-204ENST00000442975 PRPF40AO75400 957 aaKnown RBP22.63■■□□□ 1.21
CDKN3-204ENST00000442975 GJA1P17302 382 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 RFX1P22670 979 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 ACAT1P24752 427 aaKnown RBP22.63■■□□□ 1.21
CDKN3-204ENST00000442975 DPYDQ12882 1025 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 TRAPPC11Q7Z392 1133 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 DCP1BQ8IZD4 617 aaKnown RBP22.63■■□□□ 1.21
CDKN3-204ENST00000442975 LEMD2Q8NC56 503 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 DNAJC25Q9H1X3 360 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 SLITRK6Q9H5Y7 841 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 GDAP2Q9NXN4 497 aa22.63■■□□□ 1.21
CDKN3-204ENST00000442975 DDX43Q9NXZ2 648 aaKnown RBP22.63■■□□□ 1.21
CDKN3-204ENST00000442975 ZDBF2Q9HCK1 2354 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 NRG2O14511 850 aaPredicted RBP22.62■■□□□ 1.21
CDKN3-204ENST00000442975 NR3C1P04150 777 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 CASP4P49662 377 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 MYL7Q01449 175 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 VEPH1Q14D04 833 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 TMEM86AQ8N2M4 240 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 TOP6BLQ8N6T0 577 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 GPR152Q8TDT2 470 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 FAM122AQ96E09 287 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 KCTD10Q9H3F6 313 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 MAPK8IP1Q9UQF2 711 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 MUC6Q6W4X9 2439 aa22.62■■□□□ 1.21
CDKN3-204ENST00000442975 RHOBTB3O94955 611 aa22.61■■□□□ 1.21
CDKN3-204ENST00000442975 KIF20AO95235 890 aa22.61■■□□□ 1.21
CDKN3-204ENST00000442975 LRRTM3Q86VH5 581 aa22.61■■□□□ 1.21
CDKN3-204ENST00000442975 OSTM1Q86WC4 334 aa22.61■■□□□ 1.21
CDKN3-204ENST00000442975 C2orf15Q8WU43 125 aaKnown RBP22.61■■□□□ 1.21
CDKN3-204ENST00000442975 LPIN3Q9BQK8 851 aa22.61■■□□□ 1.21
CDKN3-204ENST00000442975 STK25O00506 426 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 HCRTO43612 131 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 CALUO43852 315 aaPredicted RBP22.6■■□□□ 1.21
CDKN3-204ENST00000442975 AVPR2P30518 371 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 PLA2G5P39877 138 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 TUFMP49411 452 aaKnown RBP22.6■■□□□ 1.21
CDKN3-204ENST00000442975 EPHA5P54756 1037 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 SMARCB1Q12824 385 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 BIRC3Q13489 604 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 TRPC3Q13507 836 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 TEAD2Q15562 447 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 SOWAHAQ2M3V2 549 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms