RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TWF1Q12792 350 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 UBXN2BQ14CS0 331 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 SV2CQ496J9 727 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 ZNF720Q7Z2F6 126 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 FGF14Q92915 247 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 SMARCD2Q92925 531 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 SENP8Q96LD8 212 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 DDX23Q9BUQ8 820 aaKnown RBP8.41□□□□□ -1.06
CD44-211ENST00000442151 CUEDC2Q9H467 287 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 C8orf33Q9H7E9 229 aaPredicted RBP8.41□□□□□ -1.06
CD44-211ENST00000442151 KIAA1586Q9HCI6 787 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 BLOC1S4Q9NUP1 217 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 THG1LQ9NWX6 298 aaKnown RBP8.41□□□□□ -1.06
CD44-211ENST00000442151 STYXL1Q9Y6J8 313 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 C2orf16Q68DN1 1984 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 MYH11P35749 1972 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 CITO14578 2027 aa8.41□□□□□ -1.06
CD44-211ENST00000442151 PRR23AA6NEV1 266 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 KINO60870 393 aaKnown RBP8.4□□□□□ -1.06
CD44-211ENST00000442151 MYL4P12829 197 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 GARTP22102 1010 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 WEE1P30291 646 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 SLC19A1P41440 591 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 STAT6P42226 847 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 RPS9P46781 194 aaKnown RBP8.4□□□□□ -1.06
CD44-211ENST00000442151 EPHA5P54756 1037 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 LILRA4P59901 499 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
CD44-211ENST00000442151 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
CD44-211ENST00000442151 NFE2Q16621 373 aaPredicted RBP8.4□□□□□ -1.06
CD44-211ENST00000442151 C9orf57Q5W0N0 161 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 FRMD5Q7Z6J6 570 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 MFSD6LQ8IWD5 586 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 FAM200AQ8TCP9 573 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 SPPL2BQ8TCT7 592 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 ATRIPQ8WXE1 791 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 ZNF516Q92618 1163 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 CXCL16Q9H2A7 254 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 TRPV4Q9HBA0 871 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 SPATA6Q9NWH7 488 aaPredicted RBP8.4□□□□□ -1.06
CD44-211ENST00000442151 HCFC1R1Q9NWW0 138 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 DPP3Q9NY33 737 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 OBP2AQ9NY56 170 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 WDFY4Q6ZS81 3184 aa8.4□□□□□ -1.06
CD44-211ENST00000442151 PIRO00625 290 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 CYB561D2O14569 222 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 SPTLC1O15269 473 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 DDX6P26196 483 aaKnown RBP eCLIP8.4□□□□□ -1.07
CD44-211ENST00000442151 CDC25CP30307 473 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 SNRPFP62306 86 aaKnown RBP8.4□□□□□ -1.07
CD44-211ENST00000442151 MYL7Q01449 175 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 TSPY1Q01534 308 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 LRRC32Q14392 662 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 SLC39A14Q15043 492 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 STK38Q15208 465 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 ARHGAP29Q52LW3 1261 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 SEZ6Q53EL9 994 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 PRSS36Q5K4E3 855 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 SPECC1Q5M775 1068 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 PPP1R15BQ5SWA1 713 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 L1TD1Q5T7N2 865 aaKnown RBP8.4□□□□□ -1.07
CD44-211ENST00000442151 ATL3Q6DD88 541 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 JADE1Q6IE81 842 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 RNF19BQ6ZMZ0 732 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 ADSSL1Q8N142 457 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 TMEM86AQ8N2M4 240 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 ING5Q8WYH8 240 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 ASB16Q96NS5 453 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 KXD1Q9BQD3 176 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 SLITRK6Q9H5Y7 841 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 LTB4R2Q9NPC1 389 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 OLFML3Q9NRN5 406 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 EHD2Q9NZN4 543 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 TUBGCP4Q9UGJ1 667 aa8.4□□□□□ -1.07
CD44-211ENST00000442151 ANO9A1A5B4 782 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 CHADO15335 359 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 HUS1O60921 280 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 GCNT3O95395 438 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 SEC24AO95486 1093 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 DCNP07585 359 aaKnown RBP8.39□□□□□ -1.07
CD44-211ENST00000442151 SP9P0CG40 484 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 IDEP14735 1019 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 SYT1P21579 422 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 NMT1P30419 496 aaKnown RBP8.39□□□□□ -1.07
CD44-211ENST00000442151 RPL10AP62906 217 aaKnown RBP8.39□□□□□ -1.07
CD44-211ENST00000442151 RBP5P82980 135 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 DUSP4Q13115 394 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 TANGO2Q6ICL3 276 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 CENPPQ6IPU0 288 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 TPRG1Q6ZUI0 275 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 DYMQ7RTS9 669 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 PSMG2Q969U7 264 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 CLDN23Q96B33 292 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 RPP25Q9BUL9 199 aaKnown RBP8.39□□□□□ -1.07
CD44-211ENST00000442151 MAGEF1Q9HAY2 307 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 PANK4Q9NVE7 773 aa8.39□□□□□ -1.07
CD44-211ENST00000442151 UXTQ9UBK9 157 aaPredicted RBP8.39□□□□□ -1.07
CD44-211ENST00000442151 FBXO2Q9UK22 296 aaPredicted RBP8.39□□□□□ -1.07
CD44-211ENST00000442151 RAB23Q9ULC3 237 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms