RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EHMT1Q9H9B1 1298 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 VAV3Q9UKW4 847 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PTPRQQ9UMZ3 2332 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 PNMA6FA0A0J9YX94 578 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 KANSL1LA0AUZ9 987 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 HIDE1A8MVS5 230 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 BTBD18B2RXH4 712 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 B8ZZF3 427 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RBAK-RBAKDNI3L0D1 243 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 NFIBO00712 420 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 ZBTB5O15062 677 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 NCAM2O15394 837 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 BAG4O95429 457 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RPLP2P05387 115 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 WEE2P0C1S8 567 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 GHRP10912 638 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 LAG3P18627 525 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 STARD6P59095 220 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RPS6P62753 249 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 AKAP17AQ02040 695 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 SMC1AQ14683 1233 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 PTPN14Q15678 1187 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 CDC37Q16543 378 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 AASDHQ4L235 1098 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 SEPT14Q6ZU15 432 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 HEATR3Q7Z4Q2 680 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RSPH3Q86UC2 560 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 DIS3L2Q8IYB7 885 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 SLC44A3Q8N4M1 653 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 COLGALT1Q8NBJ5 622 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 TMEM87AQ8NBN3 555 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RGS22Q8NE09 1264 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 WASF1Q92558 559 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 STAMQ92783 540 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RRP36Q96EU6 259 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 KLHL5Q96PQ7 755 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 CORO1BQ9BR76 489 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 OSBPL7Q9BZF2 842 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 MAF1Q9H063 256 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RANBP17Q9H2T7 1088 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RNPEPQ9H4A4 650 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 SLC2A4RGQ9NR83 387 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 RAD18Q9NS91 495 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 BARHL2Q9NY43 387 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 CACNA2D2Q9NY47 1150 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 DCTN4Q9UJW0 460 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 TICRRQ7Z2Z1 1910 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 MTCL1Q9Y4B5 1905 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 GOLGA4Q13439 2230 aaKnown RBP5.36□□□□□ -1.55
PTPN4-206ENST00000441089 DOPEY2Q9Y3R5 2298 aa5.36□□□□□ -1.55
PTPN4-206ENST00000441089 CELSR3Q9NYQ7 3312 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 CENPEQ02224 2701 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 DOCK6Q96HP0 2047 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 NRCAMQ92823 1304 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 TMEM238LA0A1B0GVL6 79 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 ESYT2A0FGR8 921 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 CYSRT1A8MQ03 144 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 H3BQV1 296 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 EDIL3O43854 480 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 GADD45BO75293 160 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-206ENST00000441089 CHRNA1P02708 482 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 SMIM10L2AP0DMW4 78 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 SMIM10L2BP0DMW5 78 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 U2AF2P26368 475 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPN4-206ENST00000441089 RAP1GAPP47736 663 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 NLRP5P59047 1200 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 AP3B2Q13367 1082 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 GRM2Q14416 872 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 LPIN1Q14693 890 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 STXBP2Q15833 593 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 LPAL2Q16609 132 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 LETM2Q2VYF4 491 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 TAF2Q6P1X5 1199 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 KCNV1Q6PIU1 500 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 RSPO2Q6UXX9 243 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-206ENST00000441089 SLC30A10Q6XR72 485 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 C15orf39Q6ZRI6 1047 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 TSHZ1Q6ZSZ6 1077 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 TTLL10Q6ZVT0 673 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 GPR149Q86SP6 731 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 CABP7Q86V35 215 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 ZSWIM9Q86XI8 627 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 MRPL43Q8N983 215 aaKnown RBP5.35□□□□□ -1.55
PTPN4-206ENST00000441089 DAGLBQ8NCG7 672 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 GLG1Q92896 1179 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 IWS1Q96ST2 819 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 NELL2Q99435 816 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 LSM14BQ9BX40 385 aaKnown RBP5.35□□□□□ -1.55
PTPN4-206ENST00000441089 FOXQ1Q9C009 403 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 ZMYND12Q9H0C1 365 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 SFXN1Q9H9B4 322 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 SH3GLB2Q9NR46 395 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 DDX41Q9UJV9 622 aaKnown RBP5.35□□□□□ -1.55
PTPN4-206ENST00000441089 KIF3AQ9Y496 699 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 MRVI1Q9Y6F6 885 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 SQORQ9Y6N5 450 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 KNTC1P50748 2209 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 PI4KAP42356 2102 aa5.35□□□□□ -1.55
PTPN4-206ENST00000441089 GON4LQ3T8J9 2241 aa5.34□□□□□ -1.55
PTPN4-206ENST00000441089 SMCO2A6NFE2 343 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms