RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
LTBR-203ENST00000441074 LMCD1Q9NZU5 365 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 GRID1Q9ULK0 1009 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
LTBR-203ENST00000441074 CYP4A11Q02928 519 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 TRIP13Q15645 432 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 FYB2Q5VWT5 728 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 MAP1SQ66K74 1059 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 PTCD3Q96EY7 689 aaKnown RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 C9orf72Q96LT7 481 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 ZNF184Q99676 751 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 NUP85Q9BW27 656 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 FOXP3Q9BZS1 431 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 BCAS3Q9H6U6 928 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 DMAC2Q9NW81 257 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 CCPG1Q9ULG6 757 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 GCAP28676 217 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 C1orf186Q6ZWK4 172 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 PRUNE1Q86TP1 453 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 SLC9A9Q8IVB4 645 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 ZC3H15Q8WU90 426 aaKnown RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 ZNF75CPQ92670 426 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 OPTNQ96CV9 577 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 BTBD6Q96KE9 485 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 CFAP57Q96MR6 1250 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 SMC6Q96SB8 1091 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 PCDHB18PQ96TA0 734 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 NDNQ99608 321 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 DCLK3Q9C098 648 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 UBE2OQ9C0C9 1292 aaKnown RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 MMADHCQ9H3L0 296 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 ZWILCHQ9H900 591 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 KIAA1586Q9HCI6 787 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 UBE2TQ9NPD8 197 aaPredicted RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 PKD2L1Q9P0L9 805 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 COL20A1Q9P218 1284 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 UVRAGQ9P2Y5 699 aa12.56□□□□□ -0.4
LTBR-203ENST00000441074 POLR2AP24928 1970 aaKnown RBP12.56□□□□□ -0.4
LTBR-203ENST00000441074 EXOC1LA0A1B0GW35 172 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
LTBR-203ENST00000441074 TROVE2P10155 538 aaKnown RBP eCLIP12.55□□□□□ -0.4
LTBR-203ENST00000441074 RPA3P35244 121 aaPredicted RBP12.55□□□□□ -0.4
LTBR-203ENST00000441074 ZNF76P36508 570 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 MAGEA4P43358 317 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 SLC1A5Q15758 541 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 CNPY1Q3B7I2 92 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 PABPC1LQ4VXU2 614 aaKnown RBP12.55□□□□□ -0.4
LTBR-203ENST00000441074 HHATQ5VTY9 493 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 DAB2IPQ5VWQ8 1189 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ZNF746Q6NUN9 644 aaPredicted RBP12.55□□□□□ -0.4
LTBR-203ENST00000441074 STMN2Q93045 179 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 NSL1Q96IY1 281 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 IKZF4Q9H2S9 585 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 METTL5Q9NRN9 209 aaKnown RBP12.55□□□□□ -0.4
LTBR-203ENST00000441074 FEM1BQ9UK73 627 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 NEU2Q9Y3R4 380 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 RIPK3Q9Y572 518 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 GSTTP1A0A1W2PQM5 241 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 GYG2O15488 501 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 PENKP01210 267 aaPredicted RBP12.55□□□□□ -0.4
LTBR-203ENST00000441074 LYNP07948 512 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 WDR72Q3MJ13 1102 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
LTBR-203ENST00000441074 RASIP1Q5U651 963 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ARMC3Q5W041 872 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 FAM178BQ8IXR5 827 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 SCYL3Q8IZE3 742 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ATG4AQ8WYN0 398 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ATG4CQ96DT6 458 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 HSD17B14Q9BPX1 270 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 WDR18Q9BV38 432 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 SPATA16Q9BXB7 569 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 NPHS2Q9NP85 383 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 PICK1Q9NRD5 415 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 AGPAT3Q9NRZ7 376 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ARL8BQ9NVJ2 186 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ANKFY1Q9P2R3 1169 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 ATXN10Q9UBB4 475 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 PHF24Q9UPV7 400 aa12.55□□□□□ -0.4
LTBR-203ENST00000441074 EML1O00423 815 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 P4HA2O15460 535 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 CHMP2AO43633 222 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 HAUS5O94927 633 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 PYGBP11216 843 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 CA4P22748 312 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 RRM1P23921 792 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 NMT1P30419 496 aaKnown RBP12.54□□□□□ -0.4
LTBR-203ENST00000441074 BACE1P56817 501 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 CENPCQ03188 943 aa12.54□□□□□ -0.4
LTBR-203ENST00000441074 CETN1Q12798 172 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms