RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 VNN2O95498 520 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 SP100P23497 879 aaPredicted RBP19.37■□□□□ 0.69
CPSF4-205ENST00000440514 MTHFRP42898 656 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 GCLMP48507 274 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 FKBP3Q00688 224 aaKnown RBP19.37■□□□□ 0.69
CPSF4-205ENST00000440514 SOWAHAQ2M3V2 549 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 ZACNQ401N2 412 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 C15orf39Q6ZRI6 1047 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 SV2AQ7L0J3 742 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 ADHFE1Q8IWW8 467 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 ADGRF2Q8IZF7 708 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 TOP6BLQ8N6T0 577 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 OXCT2Q9BYC2 517 aaPredicted RBP19.37■□□□□ 0.69
CPSF4-205ENST00000440514 CYP4F11Q9HBI6 524 aa19.37■□□□□ 0.69
CPSF4-205ENST00000440514 AFF4Q9UHB7 1163 aaKnown RBP19.37■□□□□ 0.69
CPSF4-205ENST00000440514 PRRG1O14668 218 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 ATF2P15336 505 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 ADCY1Q08828 1119 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 NCOA4Q13772 614 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 ZNF699Q32M78 642 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 SLC39A12Q504Y0 691 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 ATAT1Q5SQI0 421 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 TPGS2Q68CL5 300 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 CCDC149Q6ZUS6 474 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 THEM5Q8N1Q8 247 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 TMEM86AQ8N2M4 240 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 NECTIN4Q96NY8 510 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 PHF7Q9BWX1 381 aaPredicted RBP19.36■□□□□ 0.69
CPSF4-205ENST00000440514 PRKD2Q9BZL6 878 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 ZCWPW1Q9H0M4 648 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 CD320Q9NPF0 282 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 PRKAG3Q9UGI9 489 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 POLIQ9UNA4 740 aa19.36■□□□□ 0.69
CPSF4-205ENST00000440514 BICDL2A1A5D9 508 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 MTMR11A4FU01 709 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 IKBKBO14920 756 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 PAPLNO95428 1278 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 STAU1O95793 577 aaKnown RBP19.35■□□□□ 0.69
CPSF4-205ENST00000440514 HLA-DRAP01903 254 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 HNRNPA1P09651 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
CPSF4-205ENST00000440514 ACAT1P24752 427 aaKnown RBP19.35■□□□□ 0.69
CPSF4-205ENST00000440514 HOXA9P31269 272 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 ELF1P32519 619 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 PIK3CAP42336 1068 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 TNNC1P63316 161 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 GPR17Q13304 367 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 WDR72Q3MJ13 1102 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 DCAF17Q5H9S7 520 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-205ENST00000440514 TCEAL8Q8IYN2 117 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 TTC9BQ8N6N2 239 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 KBTBD7Q8WVZ9 684 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 SYAP1Q96A49 352 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-205ENST00000440514 RPGRIP1Q96KN7 1286 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 MMS19Q96T76 1030 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 CRISPLD1Q9H336 500 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 PIDD1Q9HB75 910 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 DDX43Q9NXZ2 648 aaKnown RBP19.35■□□□□ 0.69
CPSF4-205ENST00000440514 NXF1Q9UBU9 619 aaKnown RBP19.35■□□□□ 0.69
CPSF4-205ENST00000440514 INSL5Q9Y5Q6 135 aa19.35■□□□□ 0.69
CPSF4-205ENST00000440514 CLUHO75153 1309 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 ATICP31939 592 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 SSTR3P32745 418 aaPredicted RBP19.34■□□□□ 0.69
CPSF4-205ENST00000440514 ENPEPQ07075 957 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 CCDC142Q17RM4 750 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 DPCR1Q3MIW9 517 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 TCERG1LQ5VWI1 586 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 SCARA5Q6ZMJ2 495 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 LIMS2Q7Z4I7 341 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 TAS1R2Q8TE23 839 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 CEP63Q96MT8 703 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 MRPL45Q9BRJ2 306 aaKnown RBP19.34■□□□□ 0.69
CPSF4-205ENST00000440514 SMYD3Q9H7B4 428 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■■■ 46.6
CPSF4-205ENST00000440514 YIPF1Q9Y548 306 aa19.34■□□□□ 0.69
CPSF4-205ENST00000440514 C19orf67A6NJJ6 358 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 MBD3O95983 291 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 MXI1P50539 228 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 NTHL1P78549 312 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 MYL7Q01449 175 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 UVSSAQ2YD98 709 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 CCDC40Q4G0X9 1142 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 SPOPLQ6IQ16 392 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 FOXR2Q6PJQ5 311 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 DPH6Q7L8W6 267 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 LRRTM3Q86VH5 581 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 ATAD1Q8NBU5 361 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 MED15Q96RN5 788 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 PI4K2AQ9BTU6 479 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 RHOBTB2Q9BYZ6 727 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 VRTNQ9H8Y1 702 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 TMEM8AQ9HCN3 771 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 TMLHEQ9NVH6 421 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 HCFC1R1Q9NWW0 138 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 ARMCX3Q9UH62 379 aaPredicted RBP19.33■□□□□ 0.68
CPSF4-205ENST00000440514 TTC28Q96AY4 2481 aa19.33■□□□□ 0.68
CPSF4-205ENST00000440514 GABRDO14764 452 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 XYLBO75191 536 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 SOAT2O75908 522 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 LRG1P02750 347 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 WARSP23381 471 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms