RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 HUS1O60921 280 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 ECI2O75521 394 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 NPR3P17342 541 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 CASP1P29466 404 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 WNT7BP56706 349 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 TSPY1Q01534 308 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 SURF1Q15526 300 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 TAF12Q16514 161 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 CENPPQ6IPU0 288 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 CNNM4Q6P4Q7 775 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 ITIH5Q86UX2 942 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 KIAA1586Q9HCI6 787 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 FAM86C1Q9NVL1 165 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 ATP6V1DQ9Y5K8 247 aa21.39■■□□□ 1.01
SHROOM1-204ENST00000440118 MICAL2O94851 1124 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 GJA1P17302 382 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 MRE11P49959 708 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 CYP2J2P51589 502 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 CDR1P51861 262 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 RBP5P82980 135 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 MYO1EQ12965 1108 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 LMBRD2Q68DH5 695 aaPredicted RBP21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 DCP1BQ8IZD4 617 aaKnown RBP21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 LRRC52Q8N7C0 313 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 C1orf127Q8N9H9 656 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 GCNAQ96QF7 691 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 ZCWPW1Q9H0M4 648 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 CRISPLD1Q9H336 500 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 ZFP14Q9HCL3 533 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 ABI2Q9NYB9 513 aaPredicted RBP21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 RCOR1Q9UKL0 485 aa21.38■■□□□ 1.01
SHROOM1-204ENST00000440118 SOAT2O75908 522 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 CLSTN1O94985 981 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 VNN2O95498 520 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 CCR2P41597 374 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 TUFMP49411 452 aaKnown RBP21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 SNW1Q13573 536 aaKnown RBP21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 CUL4BQ13620 913 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 TEAD2Q15562 447 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 CBWD2Q8IUF1 395 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 GRAMD1CQ8IYS0 662 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 TTC9BQ8N6N2 239 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 C2orf15Q8WU43 125 aaKnown RBP21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 ELSPBP1Q96BH3 223 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 FAM84AQ96KN4 292 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 FNBP1Q96RU3 617 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 SLC39A2Q9NP94 309 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 AGPAT3Q9NRZ7 376 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 EXOC1Q9NV70 894 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 SERTAD1Q9UHV2 236 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 ASB3Q9Y575 518 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 SNX9Q9Y5X1 595 aa21.37■■□□□ 1.01
SHROOM1-204ENST00000440118 PVALEFA0A1B0GWK0 134 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 A0A1W2PRU2 124 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 PI15O43692 258 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 SLFN14P0C7P3 912 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 DLATP10515 647 aaKnown RBP21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 PFKFB1P16118 471 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 MYL7Q01449 175 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 SMARCB1Q12824 385 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 GRM2Q14416 872 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 MLF2Q15773 248 aaPredicted RBP21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 SNRNP35Q16560 246 aaKnown RBP21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 FAM78AQ5JUQ0 283 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 TANGO2Q6ICL3 276 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 EPM2AIP1Q7L775 607 aaPredicted RBP21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 CCDC105Q8IYK2 499 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 RDH13Q8NBN7 331 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 ZSCAN18Q8TBC5 510 aaPredicted RBP21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 ZNF507Q8TCN5 953 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 LEO1Q8WVC0 666 aaPredicted RBP21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 SMARCD2Q92925 531 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 HSFX1Q9UBD0 423 aa21.36■■□□□ 1.01
SHROOM1-204ENST00000440118 A0A1B0GVL5 298 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 CLIC2O15247 247 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 FGF19O95750 216 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 TNNI1P19237 187 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 EPHA5P54756 1037 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 SNRPFP62306 86 aaKnown RBP21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 BECN1Q14457 450 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 DUOXA2Q1HG44 320 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 ARHGAP15Q53QZ3 475 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 PHLDB3Q6NSJ2 640 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 TMEM86AQ8N2M4 240 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 PDCL2Q8N4E4 241 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 DTWD2Q8NBA8 298 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 SHKBP1Q8TBC3 707 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 SPPL2BQ8TCT7 592 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 SCFD1Q8WVM8 642 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 ASB16Q96NS5 453 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 GPR88Q9GZN0 384 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 DNAJC25Q9H1X3 360 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 BRD9Q9H8M2 597 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 INTS13Q9NVM9 706 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 SIT1Q9Y3P8 196 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 TICRRQ7Z2Z1 1910 aa21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 NUP210Q8TEM1 1887 aaPredicted RBP21.35■■□□□ 1.01
SHROOM1-204ENST00000440118 ZNF638Q14966 1978 aaKnown RBP21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 HOXD13P35453 343 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 PRKCQQ04759 706 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms