RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 HPDLQ96IR7 371 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 GSDMAQ96QA5 445 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 ZCWPW1Q9H0M4 648 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.43■■□□□ 1.66
VARS-217ENST00000440048 HOOK1Q9UJC3 728 aaKnown RBP25.43■■□□□ 1.66
VARS-217ENST00000440048 PCDHA5Q9Y5H7 936 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 SNX9Q9Y5X1 595 aa25.43■■□□□ 1.66
VARS-217ENST00000440048 SMC2O95347 1197 aa25.42■■□□□ 1.66
VARS-217ENST00000440048 DUSP4Q13115 394 aa25.42■■□□□ 1.66
VARS-217ENST00000440048 PABPC1LQ4VXU2 614 aaKnown RBP25.42■■□□□ 1.66
VARS-217ENST00000440048 SPATA20Q8TB22 786 aa25.42■■□□□ 1.66
VARS-217ENST00000440048 PARD3BQ8TEW8 1205 aa25.42■■□□□ 1.66
VARS-217ENST00000440048 CRISPLD1Q9H336 500 aa25.42■■□□□ 1.66
VARS-217ENST00000440048 EPS15L1Q9UBC2 864 aa25.42■■□□□ 1.66
VARS-217ENST00000440048 MTMR11A4FU01 709 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 CST3P01034 146 aaPredicted RBP25.41■■□□□ 1.66
VARS-217ENST00000440048 TWF1Q12792 350 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 NFIL3Q16649 462 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 CEP135Q66GS9 1140 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 CENPPQ6IPU0 288 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 ELOA2Q8IYF1 753 aaPredicted RBP25.41■■□□□ 1.66
VARS-217ENST00000440048 ATAD1Q8NBU5 361 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 ITFG1Q8TB96 612 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 SMARCE1Q969G3 411 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 YIPF1Q9Y548 306 aa25.41■■□□□ 1.66
VARS-217ENST00000440048 MUC6Q6W4X9 2439 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 LRRIQ3A6PVS8 624 aaPredicted RBP25.4■■□□□ 1.66
VARS-217ENST00000440048 KINO60870 393 aaKnown RBP25.4■■□□□ 1.66
VARS-217ENST00000440048 RHOP08100 348 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 PTPN2P17706 415 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 SLC39A12Q504Y0 691 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 ZNF658Q5TYW1 1059 aaPredicted RBP25.4■■□□□ 1.66
VARS-217ENST00000440048 LRRTM3Q86VH5 581 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 TMEM86AQ8N2M4 240 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 TOP6BLQ8N6T0 577 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 SORCS3Q9UPU3 1222 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 FRMD4BQ9Y2L6 1034 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 SLC27A5Q9Y2P5 690 aa25.4■■□□□ 1.66
VARS-217ENST00000440048 ZDBF2Q9HCK1 2354 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 LAMP2P13473 410 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 NR2F2P24468 414 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 CLDN10P78369 228 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 SOWAHAQ2M3V2 549 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 ZCWPW2Q504Y3 356 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 OSTM1Q86WC4 334 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 TTC9BQ8N6N2 239 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 CORO1BQ9BR76 489 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 KCNK12Q9HB15 430 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 AVENQ9NQS1 362 aaPredicted RBP25.39■■□□□ 1.66
VARS-217ENST00000440048 DDX43Q9NXZ2 648 aaKnown RBP25.39■■□□□ 1.66
VARS-217ENST00000440048 CEP72Q9P209 647 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 CDH7Q9ULB5 785 aa25.39■■□□□ 1.66
VARS-217ENST00000440048 PRCPP42785 496 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 CDR1P51861 262 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 AP3M2P53677 418 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 DLG4P78352 724 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 MTMR3Q13615 1198 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 TRIM67Q6ZTA4 783 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 LIMS2Q7Z4I7 341 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 ADGRF2Q8IZF7 708 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 ELMOD1Q8N336 334 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 SPATA18Q8TC71 538 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 TMC2Q8TDI7 906 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 FGF13Q92913 245 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 ZNF512Q96ME7 567 aaPredicted RBP25.38■■□□□ 1.65
VARS-217ENST00000440048 SMOC2Q9H3U7 446 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 IGSF9Q9P2J2 1179 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 MRPS23Q9Y3D9 190 aaKnown RBP25.38■■□□□ 1.65
VARS-217ENST00000440048 ZFP37Q9Y6Q3 630 aaPredicted RBP25.38■■□□□ 1.65
VARS-217ENST00000440048 ZNF318Q5VUA4 2279 aa25.38■■□□□ 1.65
VARS-217ENST00000440048 MAPK13O15264 365 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 RPL13P26373 211 aaKnown RBP25.37■■□□□ 1.65
VARS-217ENST00000440048 MYL7Q01449 175 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 TSPY1Q01534 308 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 PLD1Q13393 1074 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 TRPC3Q13507 836 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 SLC5A9Q2M3M2 681 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 COBLL1Q53SF7 1204 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 TDRD10Q5VZ19 366 aaKnown RBP25.37■■□□□ 1.65
VARS-217ENST00000440048 DPH6Q7L8W6 267 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 DCP1BQ8IZD4 617 aaKnown RBP25.37■■□□□ 1.65
VARS-217ENST00000440048 ACBD6Q9BR61 282 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 HSFX1Q9UBD0 423 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 RAPGEFL1Q9UHV5 662 aa25.37■■□□□ 1.65
VARS-217ENST00000440048 GABRDO14764 452 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 PHACTR2O75167 634 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 AKAP3O75969 853 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 C4BPAP04003 597 aaKnown RBP25.36■■□□□ 1.65
VARS-217ENST00000440048 ACAT1P24752 427 aaKnown RBP25.36■■□□□ 1.65
VARS-217ENST00000440048 ALDH1A3P47895 512 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 LHX1P48742 406 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 MYL6P60660 151 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 UBE2HP62256 183 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 SIGLEC14Q08ET2 396 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 SMARCB1Q12824 385 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 ADAM9Q13443 819 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 BIRC3Q13489 604 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 EDRF1Q3B7T1 1238 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 IQCEQ6IPM2 695 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 BMP8AQ7Z5Y6 402 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms