RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 CDO1Q16878 200 aa15.68■□□□□ 0.1
TSC2-206ENST00000439117 P3H1Q32P28 736 aa15.68■□□□□ 0.1
TSC2-206ENST00000439117 RTFDC1Q9BY42 306 aaPredicted RBP15.68■□□□□ 0.1
TSC2-206ENST00000439117 AGO2Q9UKV8 859 aaKnown RBP15.68■□□□□ 0.1
TSC2-206ENST00000439117 ATP9AO75110 1047 aa15.68■□□□□ 0.1
TSC2-206ENST00000439117 NMT1P30419 496 aaKnown RBP15.68■□□□□ 0.1
TSC2-206ENST00000439117 YTHDF3Q7Z739 585 aaKnown RBP15.68■□□□□ 0.1
TSC2-206ENST00000439117 ANKMY2Q8IV38 441 aa15.68■□□□□ 0.1
TSC2-206ENST00000439117 GPD1LQ8N335 351 aa15.68■□□□□ 0.1
TSC2-206ENST00000439117 NMD3Q96D46 503 aaKnown RBP15.68■□□□□ 0.1
TSC2-206ENST00000439117 TMA16Q96EY4 203 aaKnown RBP15.68■□□□□ 0.1
TSC2-206ENST00000439117 STK33Q9BYT3 514 aa15.68■□□□□ 0.1
TSC2-206ENST00000439117 ZNF200P98182 395 aaPredicted RBP15.67■□□□□ 0.1
TSC2-206ENST00000439117 POU5F1BQ06416 359 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 MICU2Q8IYU8 434 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 FUKQ8N0W3 1084 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 KCNB2Q92953 911 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 ATG4CQ96DT6 458 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 SH3GL1Q99961 368 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 MARCOQ9UEW3 520 aaPredicted RBP15.67■□□□□ 0.1
TSC2-206ENST00000439117 DDX20Q9UHI6 824 aaKnown RBP15.67■□□□□ 0.1
TSC2-206ENST00000439117 MAD2L2Q9UI95 211 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 AIM2O14862 343 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 ZNF18P17022 549 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 PTPN4P29074 926 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 CAP2P40123 477 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 ZNF157P51786 506 aaPredicted RBP15.67■□□□□ 0.1
TSC2-206ENST00000439117 RNF149Q8NC42 400 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 ERGIC2Q96RQ1 377 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 C7orf25Q9BPX7 421 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 MAGEB5Q9BZ81 275 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 RBAKQ9NYW8 714 aaPredicted RBP15.67■□□□□ 0.1
TSC2-206ENST00000439117 SNX2O60749 519 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 IL1R1P14778 569 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 ZKSCAN4Q969J2 545 aaPredicted RBP15.67■□□□□ 0.1
TSC2-206ENST00000439117 E2F7Q96AV8 911 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 CPSF3Q9UKF6 684 aaKnown RBP15.67■□□□□ 0.1
TSC2-206ENST00000439117 CDY2AQ9Y6F7 541 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 CDY1Q9Y6F8 540 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 PSMC3P17980 439 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 CALB2P22676 271 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 RCOR2Q8IZ40 523 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 CHST13Q8NET6 341 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 OR6J1Q8NGC5 347 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 JADE3Q92613 823 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 PPP2R3CQ969Q6 453 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 RIT2Q99578 217 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 UBE4BO95155 1302 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 RICTORQ6R327 1708 aa15.67■□□□□ 0.1
TSC2-206ENST00000439117 NFIBO00712 420 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 MAFGO15525 162 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 AHCYL1O43865 530 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 SNRPAP09012 282 aaKnown RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 TMEM253P0C7T8 217 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 TRIM49P0CI25 452 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 TRIM49CP0CI26 452 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 CCDC103Q8IW40 242 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 THEM5Q8N1Q8 247 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 C20orf96Q9NUD7 363 aaPredicted RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 SCN3BQ9NY72 215 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 POLRMTO00411 1230 aaKnown RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 VCAM1P19320 739 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 MMP14P50281 582 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 ACTR2P61160 394 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 TRMT5Q32P41 509 aaKnown RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 AASDHQ4L235 1098 aaPredicted RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 SCUBE1Q8IWY4 988 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 TRAPPC9Q96Q05 1148 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 MXRA8Q9BRK3 442 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 PLAGL2Q9UPG8 496 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 RASSF9O75901 435 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 UCHL3P15374 230 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 KLRC1P26715 233 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 FASTKD1Q53R41 847 aaKnown RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 XRRA1Q6P2D8 792 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 CDC26Q8NHZ8 85 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 BRD8Q9H0E9 1235 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 DIABLOQ9NR28 239 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 PARVAQ9NVD7 372 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 HEY2Q9UBP5 337 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 ADGRA3Q8IWK6 1321 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 SLC16A3O15427 465 aaKnown RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 PJA2O43164 708 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 RAB14P61106 215 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 TSTA3Q13630 321 aaPredicted RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 INAQ16352 499 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 CELF4Q9BZC1 486 aaKnown RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 SMARCAD1Q9H4L7 1026 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 RUBCNLQ9H714 662 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 AIPL1Q9NZN9 384 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 KCND2Q9NZV8 630 aa15.66■□□□□ 0.1
TSC2-206ENST00000439117 ZMYND8Q9ULU4 1186 aaPredicted RBP15.66■□□□□ 0.1
TSC2-206ENST00000439117 CCL15-CCL14A0A0B4J2E2 113 aa15.65■□□□□ 0.1
TSC2-206ENST00000439117 CETPP11597 493 aa15.65■□□□□ 0.1
TSC2-206ENST00000439117 CPA2P48052 419 aa15.65■□□□□ 0.1
TSC2-206ENST00000439117 AP3M2P53677 418 aa15.65■□□□□ 0.1
TSC2-206ENST00000439117 CCL15Q16663 113 aa15.65■□□□□ 0.1
TSC2-206ENST00000439117 ANGPTL8Q6UXH0 198 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms