RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ZNF512Q96ME7 567 aaPredicted RBP26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 TIGD1Q96MW7 591 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 ZCWPW1Q9H0M4 648 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 HSFX1Q9UBD0 423 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 TRAF3IP3Q9Y228 551 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 SNX9Q9Y5X1 595 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 MYO10Q9HD67 2058 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 MTMR11A4FU01 709 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 NR3C1P04150 777 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 DUSP4Q13115 394 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 TDGQ13569 410 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 CENPPQ6IPU0 288 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 DCP1BQ8IZD4 617 aaKnown RBP26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 PDCL2Q8N4E4 241 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 C2orf15Q8WU43 125 aaKnown RBP26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 FRMD4BQ9Y2L6 1034 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 MRPS23Q9Y3D9 190 aaKnown RBP26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 YIPF1Q9Y548 306 aa26.59■■□□□ 1.85
RAPGEF1-206ENST00000438647 DOCK8Q8NF50 2099 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 TMEM221A6NGB7 291 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 M0R296 226 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 SMC2O95347 1197 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 ALDH1A3P47895 512 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 AP3M2P53677 418 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 MYL7Q01449 175 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 TSPY1Q01534 308 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 PNOCQ13519 176 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 SLC39A12Q504Y0 691 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 DPH6Q7L8W6 267 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 LEMD2Q8NC56 503 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 FGF13Q92913 245 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 TMEM209Q96SK2 561 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 RTP3Q9BQQ7 232 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 CORO1BQ9BR76 489 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 CHMP5Q9NZZ3 219 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 L1RE1Q9UN81 338 aa26.58■■□□□ 1.85
RAPGEF1-206ENST00000438647 TECTAO75443 2155 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 DOCK6Q96HP0 2047 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 ZNF197O14709 1029 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 VNN2O95498 520 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 EPHB3P54753 998 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 NFIL3Q16649 462 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 CYP4A22Q5TCH4 519 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 PDZD4Q76G19 769 aaPredicted RBP26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 BMP8AQ7Z5Y6 402 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 ATAD1Q8NBU5 361 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 ITFG1Q8TB96 612 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 GSDMAQ96QA5 445 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 GTPBP4Q9BZE4 634 aaKnown RBP26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 MAPK8IP1Q9UQF2 711 aa26.57■■□□□ 1.84
RAPGEF1-206ENST00000438647 LHX1P48742 406 aa26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 TUFMP49411 452 aaKnown RBP26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 TRPC3Q13507 836 aa26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 ADGRF2Q8IZF7 708 aa26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 SPPL2BQ8TCT7 592 aa26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 PARD3BQ8TEW8 1205 aa26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 ACBD6Q9BR61 282 aa26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 ASAH2Q9NR71 780 aa26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 DDX43Q9NXZ2 648 aaKnown RBP26.56■■□□□ 1.84
RAPGEF1-206ENST00000438647 KINO60870 393 aaKnown RBP26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 NR2F2P24468 414 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 RPL13P26373 211 aaKnown RBP26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 NFE2Q16621 373 aaPredicted RBP26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 CEP135Q66GS9 1140 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 SCARA3Q6AZY7 606 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 HFE2Q6ZVN8 426 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 MTSS1LQ765P7 747 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 ELOA2Q8IYF1 753 aaPredicted RBP26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 SMARCE1Q969G3 411 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 GZF1Q9H116 711 aaPredicted RBP26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 CRISPLD1Q9H336 500 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 GDE1Q9NZC3 331 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 CEP72Q9P209 647 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 DUSP12Q9UNI6 340 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 SLC27A5Q9Y2P5 690 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 ASB3Q9Y575 518 aa26.55■■□□□ 1.84
RAPGEF1-206ENST00000438647 ANHXE9PGG2 379 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 MAPK13O15264 365 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 PHACTR2O75167 634 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 MICAL2O94851 1124 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 COL9A1P20849 921 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 PCSK1P29120 753 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 CLDN10P78369 228 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 HTR4Q13639 388 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 NPAS3Q8IXF0 933 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 PBXIP1Q96AQ6 731 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 ASIC4Q96FT7 647 aa26.54■■□□□ 1.84
RAPGEF1-206ENST00000438647 ATICP31939 592 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 CASP4P49662 377 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 BIRC3Q13489 604 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 SLC5A9Q2M3M2 681 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 SOWAHAQ2M3V2 549 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 MGAT5BQ3V5L5 792 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 ZNF658Q5TYW1 1059 aaPredicted RBP26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 ITIH5Q86UX2 942 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 TMC2Q8TDI7 906 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 ZNF516Q92618 1163 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 SYAP1Q96A49 352 aaPredicted RBP26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 SEPT5Q99719 369 aaPredicted RBP26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 HCN4Q9Y3Q4 1203 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms