RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ASAP2O43150 1006 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 MED24O75448 989 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 DGAT1O75907 488 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 ABLIM3O94929 683 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 SEC24AO95486 1093 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 NPTXRO95502 500 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 EGFP01133 1207 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 CFIP05156 583 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 PRKCBP05771 671 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 XRCC6P12956 609 aaKnown RBP eCLIP11.41□□□□□ -0.58
CPNE1-214ENST00000435747 ATF2P15336 505 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 GLRA2P23416 452 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 TKTP29401 623 aaKnown RBP11.41□□□□□ -0.58
CPNE1-214ENST00000435747 MCM7P33993 719 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 TOB1P50616 345 aaPredicted RBP11.41□□□□□ -0.58
CPNE1-214ENST00000435747 EPHA5P54756 1037 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 ARPP19P56211 112 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 HMGN5P82970 282 aaKnown RBP11.41□□□□□ -0.58
CPNE1-214ENST00000435747 CYP4F3Q08477 520 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 CAPSQ13938 189 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 TRIM29Q14134 588 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 DMC1Q14565 340 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 SYT12Q8IV01 421 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 NOSTRINQ8IVI9 506 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 TSTD1Q8NFU3 115 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 RPLP0P6Q8NHW5 317 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 ASAP3Q8TDY4 903 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 TCP11Q8WWU5 503 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 ACDQ96AP0 544 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
CPNE1-214ENST00000435747 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 MTRQ99707 1265 aa11.41□□□□□ -0.58
CPNE1-214ENST00000435747 MYO16Q9Y6X6 1858 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 TRIP11Q15643 1979 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 A0A087WWV3 80 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 INO80B-WBP1J3KQ70 363 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 TRDMT1O14717 391 aaKnown RBP11.4□□□□□ -0.58
CPNE1-214ENST00000435747 MARCH6O60337 910 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 THP07101 528 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 DPP6P42658 865 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 TRAPPC10P48553 1259 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 CFHR1Q03591 330 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 MBTD1Q05BQ5 628 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 TWF1Q12792 350 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 MXD4Q14582 209 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-214ENST00000435747 SLC8B1Q6J4K2 584 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 SLC23A3Q6PIS1 610 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 ARMCX6Q7L4S7 300 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 LPCAT2Q7L5N7 544 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 PIGOQ8TEQ8 1089 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 LRRC3BQ96PB8 259 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 POLR3CQ9BUI4 534 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-214ENST00000435747 TUFT1Q9NNX1 390 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 CEP72Q9P209 647 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 APOBEC2Q9Y235 224 aaKnown RBP11.4□□□□□ -0.58
CPNE1-214ENST00000435747 STK24Q9Y6E0 443 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 PTPRDP23468 1912 aa11.4□□□□□ -0.58
CPNE1-214ENST00000435747 KIAA1549LQ6ZVL6 1849 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 ZNF638Q14966 1978 aaKnown RBP11.39□□□□□ -0.59
CPNE1-214ENST00000435747 CEP192Q8TEP8 1941 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-214ENST00000435747 A0A1W2PRU2 124 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 TNFRSF10BO14763 440 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 TRAPPC3O43617 180 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 B3GAT3O94766 335 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 OR52Z1P0C646 297 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 CD59P13987 128 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 ARF4P18085 180 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-214ENST00000435747 DRD1P21728 446 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 RPA1P27694 616 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■□□ 18.4
CPNE1-214ENST00000435747 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-214ENST00000435747 SRSF1Q07955 248 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPNE1-214ENST00000435747 NBR1Q14596 966 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 RABEP1Q15276 862 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 SAFBQ15424 915 aaKnown RBP eCLIP11.39□□□□□ -0.591e-17■■■■□ 20.2
CPNE1-214ENST00000435747 ZNF174Q15697 407 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 ECM1Q16610 540 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 FBXO43Q4G163 708 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 CDCA2Q69YH5 1023 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-214ENST00000435747 SLC27A1Q6PCB7 646 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 CDR2LQ86X02 465 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-214ENST00000435747 BPIFB1Q8TDL5 484 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 CAMK1GQ96NX5 476 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 PRORYQ9H606 182 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 FSCN3Q9NQT6 498 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 TMEM74BQ9NUR3 256 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 OBP2AQ9NY56 170 aa11.39□□□□□ -0.59
CPNE1-214ENST00000435747 ATXN2Q99700 1313 aaKnown RBP11.38□□□□□ -0.59
CPNE1-214ENST00000435747 TMEM189-UBE2V1I3L0A0 370 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 PTGESO14684 152 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 SH3BP5O60239 455 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 NTRK1P04629 796 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 ATP2B1P20020 1258 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 AMPD2Q01433 879 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 GFPT1Q06210 699 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-214ENST00000435747 IL17AQ16552 155 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 TTC38Q5R3I4 469 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 STXBP5Q5T5C0 1151 aa11.38□□□□□ -0.59
CPNE1-214ENST00000435747 TPGS2Q68CL5 300 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms