RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TMEM35BQ8NCS4 154 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MTMR12Q9C0I1 747 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CISHQ9NSE2 258 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DNPEPQ9ULA0 475 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 NAALADL1Q9UQQ1 740 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PI4K2BG5E9Z4 385 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 KRT1P04264 644 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 HARSP12081 509 aaKnown RBP17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 KRT10P13645 584 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 EIF4BP23588 611 aaKnown RBP17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GJC1P36383 396 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SSR1P43307 286 aaKnown RBP17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SURF1Q15526 300 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SGSM1Q2NKQ1 1148 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DNAJC24Q6P3W2 148 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 METTL7BQ6UX53 244 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SEPT1Q8WYJ6 367 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 NKD2Q969F2 451 aaPredicted RBP17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 FAM167AQ96KS9 214 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 KLHL11Q9NVR0 708 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 BTBD7Q9P203 1132 aa17■□□□□ 0.31
HLA-DQB2-231ENST00000435145 hCG_1818297A0A087WSY0 165 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 IGKV6-21A0A0C4DH24 114 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 F8VP50 259 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GAS2O43903 313 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 BRAFP15056 766 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TCF7P36402 384 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MAGEA4P43358 317 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PIGHQ14442 188 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 LRRC14Q15048 493 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 OASLQ15646 514 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DUOXA2Q1HG44 320 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TRPM8Q7Z2W7 1104 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PRUNE1Q86TP1 453 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GLIS1Q8NBF1 620 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MAML1Q92585 1016 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SGSM3Q96HU1 749 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 C9orf72Q96LT7 481 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MCEEQ96PE7 176 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 RBM15Q96T37 977 aaKnown RBP eCLIP16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CCDC77Q9BR77 488 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 XYLT2Q9H1B5 865 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SNCAIPQ9Y6H5 919 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 VGLL3A8MV65 326 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ZBTB42B2RXF5 422 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 HOXC6P09630 235 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PROZP22891 400 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CDKN2BP42772 138 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 LAMTOR4Q0VGL1 99 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CYB5D1Q6P9G0 228 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GSTA5Q7RTV2 222 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TDRPQ86YL5 185 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TFAP2BQ92481 460 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 HAUS2Q9NVX0 235 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DDX56Q9NY93 547 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
HLA-DQB2-231ENST00000435145 FOXO6A8MYZ6 492 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TCP11X1B4DZS4 312 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 LGR5O75473 907 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PRKCBP05771 671 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 NF2P35240 595 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ASPAP45381 313 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 VCPP55072 806 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MXD4Q14582 209 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TXNRD3NBQ6F5E7 133 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GPAT2Q6NUI2 795 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TCP11Q8WWU5 503 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PTPRHQ9HD43 1115 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 USP15Q9Y4E8 981 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PTPRFP10586 1907 aa16.98■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PEX10O60683 326 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 USP2O75604 605 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ITGAVP06756 1048 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MORF4L2Q15014 288 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TFDP3Q5H9I0 405 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 POLNQ7Z5Q5 900 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MGARPQ8TDB4 240 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DYDC1Q8WWB3 177 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CFAP57Q96MR6 1250 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TTC25Q96NG3 672 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 FGFR1OP2Q9NVK5 253 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 EFR3BQ9Y2G0 817 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PAPPA2Q9BXP8 1791 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 C3orf70A6NLC5 250 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 B4GALT4O60513 344 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ZBTB7AO95365 584 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GH1P01241 217 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ATF7P17544 494 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 GCAP28676 217 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MKRN3Q13064 507 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MAPK6Q16659 721 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 RNASEH2BQ5TBB1 312 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 KAZNQ674X7 775 aa16.97■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DCUN1D2Q6PH85 259 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms