RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 FNBP1LQ5T0N5 605 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 SNRNP27Q8WVK2 155 aaKnown RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 UBE2OQ9C0C9 1292 aaKnown RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 VCXQ9H320 206 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 SPATA31A6Q5VVP1 1343 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 F8VP50 259 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 H3BRJ5 948 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 SGK1O00141 431 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 GSC2O15499 205 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 FESP07332 822 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 PEX6Q13608 980 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 PDK4Q16654 411 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 C6orf163Q5TEZ5 329 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 BSPRYQ5W0U4 402 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 RAB3IL1Q8TBN0 382 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 FAM136AQ96C01 138 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 BICD1Q96G01 975 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 FAM111AQ96PZ2 611 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 KRT82Q9NSB4 513 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 TAS2R1Q9NYW7 299 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 UMODL1Q5DID0 1318 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 IPO5O00410 1097 aaKnown RBP11.02□□□□□ -0.64
SCAF4-203ENST00000434667 AVILO75366 819 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 TRPA1O75762 1119 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 PTPN4P29074 926 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 RPS6KA3P51812 740 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 LRRC74BQ6ZQY2 392 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 SV2AQ7L0J3 742 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 MCOLN2Q8IZK6 566 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 CCDC33Q8N5R6 958 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 C12orf50Q8NA57 414 aaPredicted RBP11.02□□□□□ -0.64
SCAF4-203ENST00000434667 SHC3Q92529 594 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 KIFAP3Q92845 792 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 CCDC124Q96CT7 223 aaKnown RBP11.02□□□□□ -0.64
SCAF4-203ENST00000434667 TUBGCP5Q96RT8 1024 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 EPAS1Q99814 870 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 TMEM120AQ9BXJ8 343 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 NMUR2Q9GZQ4 415 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 GINM1Q9NU53 330 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 RHBDL2Q9NX52 303 aa11.02□□□□□ -0.64
SCAF4-203ENST00000434667 KIF3CO14782 793 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 ONECUT3O60422 494 aaPredicted RBP11.02□□□□□ -0.65
SCAF4-203ENST00000434667 GGPS1O95749 300 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 AP3B2Q13367 1082 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 TMED1Q13445 227 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 PARP6Q2NL67 630 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 NLRX1Q86UT6 975 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 FGD4Q96M96 766 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 IVNS1ABPQ9Y6Y0 642 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 F5H423 210 aaPredicted RBP11.02□□□□□ -0.65
SCAF4-203ENST00000434667 CYB561D2O14569 222 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 HAUS5O94927 633 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 ITGB5P18084 799 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 CCNG1P51959 295 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 MFAP3P55082 362 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 CROCCP2Q86T23 111 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 RHPN2Q8IUC4 686 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 PIP4K2CQ8TBX8 421 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 NACC1Q96RE7 527 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 WDR83Q9BRX9 315 aaKnown RBP11.02□□□□□ -0.65
SCAF4-203ENST00000434667 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.65
SCAF4-203ENST00000434667 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 TDRD3Q9H7E2 651 aaKnown RBP11.02□□□□□ -0.65
SCAF4-203ENST00000434667 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 LGALS13Q9UHV8 139 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 ZHX2Q9Y6X8 837 aa11.02□□□□□ -0.65
SCAF4-203ENST00000434667 GMPRP36959 345 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 CCNFP41002 786 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 ACOT2P49753 483 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 ACVR2BQ13705 512 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 STAT4Q14765 748 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 CLEC16AQ2KHT3 1053 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 CRY2Q49AN0 593 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 LRRC43Q8N309 656 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 GSDMBQ8TAX9 411 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 MAGED2Q9UNF1 606 aaPredicted RBP11.01□□□□□ -0.65
SCAF4-203ENST00000434667 E2F8A0AVK6 867 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 AHCYL1O43865 530 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 DCTN3O75935 186 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 PSMG1O95456 288 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 MYL2P10916 166 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 KLRC2P26717 231 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 HADHBP55084 474 aaKnown RBP11.01□□□□□ -0.65
SCAF4-203ENST00000434667 MRPS35P82673 323 aaKnown RBP11.01□□□□□ -0.65
SCAF4-203ENST00000434667 KLF1Q13351 362 aaPredicted RBP11.01□□□□□ -0.65
SCAF4-203ENST00000434667 LAMB3Q13751 1172 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 WDR72Q3MJ13 1102 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 ZCCHC23Q6ZST2 131 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 TREML1Q86YW5 311 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 IGDCC3Q8IVU1 814 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCAF4-203ENST00000434667 RAB20Q9NX57 234 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 CHMP2BQ9UQN3 213 aa11.01□□□□□ -0.65
SCAF4-203ENST00000434667 CLUHO75153 1309 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms