RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 WSCD1Q658N2 575 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 SCARA3Q6AZY7 606 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 GAREM2Q75VX8 874 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 ZNF687Q8N1G0 1237 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 SNX21Q969T3 373 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 PSMG2Q969U7 264 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 CBWD1Q9BRT8 395 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 TRMT61BQ9BVS5 477 aaKnown RBP21.72■■□□□ 1.07
HLA-B-250ENST00000434333 BRD9Q9H8M2 597 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 ASB3Q9Y575 518 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 R4GN57 208 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 TICRRQ7Z2Z1 1910 aa21.72■■□□□ 1.07
HLA-B-250ENST00000434333 PTPRZ1P23471 2315 aaPredicted RBP21.72■■□□□ 1.07
HLA-B-250ENST00000434333 KPNA7A9QM74 516 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 SPTLC2O15270 562 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 PPP6R2O75170 966 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 PRPF6O94906 941 aaKnown RBP21.71■■□□□ 1.07
HLA-B-250ENST00000434333 PSMC3P17980 439 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 ATF6P18850 670 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 CDR1P51861 262 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 SLC39A12Q504Y0 691 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 DNAJB7Q7Z6W7 309 aaPredicted RBP21.71■■□□□ 1.07
HLA-B-250ENST00000434333 LRRTM3Q86VH5 581 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 C1orf127Q8N9H9 656 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 GLIS3Q8NEA6 775 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 CXorf38Q8TB03 319 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 DEPDC1BQ8WUY9 529 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 CLDN23Q96B33 292 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 FAM84AQ96KN4 292 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 BCO2Q9BYV7 579 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 GPR88Q9GZN0 384 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 TRPV5Q9NQA5 729 aa21.71■■□□□ 1.07
HLA-B-250ENST00000434333 TFIP11Q9UBB9 837 aaKnown RBP21.71■■□□□ 1.07
HLA-B-250ENST00000434333 GOLGA8IPA6NC78 632 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 GOLGA8JA6NMD2 632 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 HEPACAM2A8MVW5 462 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 ARNTLO00327 626 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 LDHAP00338 332 aaKnown RBP21.7■■□□□ 1.06
HLA-B-250ENST00000434333 GDI1P31150 447 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 SV2CQ496J9 727 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 IRF7Q92985 503 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 NELL2Q99435 816 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 LPIN3Q9BQK8 851 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 TNMDQ9H2S6 317 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 KBTBD4Q9NVX7 518 aa21.7■■□□□ 1.06
HLA-B-250ENST00000434333 RBAKQ9NYW8 714 aaPredicted RBP21.7■■□□□ 1.06
HLA-B-250ENST00000434333 NUP210Q8TEM1 1887 aaPredicted RBP21.69■■□□□ 1.06
HLA-B-250ENST00000434333 POLR2BP30876 1174 aaKnown RBP21.69■■□□□ 1.06
HLA-B-250ENST00000434333 MAGEA9P43362 315 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 TFAMQ00059 246 aaKnown RBP21.69■■□□□ 1.06
HLA-B-250ENST00000434333 SHC4Q6S5L8 630 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 ZNF852Q6ZMS4 543 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 METTL23Q86XA0 190 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 MFSD6LQ8IWD5 586 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 CCDC65Q8IXS2 484 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 SYCP3Q8IZU3 236 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 ADSSL1Q8N142 457 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 HPS3Q969F9 1004 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 ZNF560Q96MR9 790 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 SEMA4AQ9H3S1 761 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 PCIF1Q9H4Z3 704 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 SLITRK6Q9H5Y7 841 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 IL21Q9HBE4 155 aa21.69■■□□□ 1.06
HLA-B-250ENST00000434333 F5P12259 2224 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 GVINP1Q7Z2Y8 2422 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 EXTL3O43909 919 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 YEATS4O95619 227 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 ITGB3P05106 788 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 GABRR2P28476 465 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 PNPLA4P41247 253 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 RPS9P46781 194 aaKnown RBP21.68■■□□□ 1.06
HLA-B-250ENST00000434333 TUFMP49411 452 aaKnown RBP21.68■■□□□ 1.06
HLA-B-250ENST00000434333 MGAT5BQ3V5L5 792 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 THEM5Q8N1Q8 247 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 SEPT5Q99719 369 aaPredicted RBP21.68■■□□□ 1.06
HLA-B-250ENST00000434333 TRIM9Q9C026 710 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 TMEM206Q9H813 350 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 PDE11AQ9HCR9 933 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 SPATA6Q9NWH7 488 aaPredicted RBP21.68■■□□□ 1.06
HLA-B-250ENST00000434333 AGAP1Q9UPQ3 857 aa21.68■■□□□ 1.06
HLA-B-250ENST00000434333 HAPLN1P10915 354 aaPredicted RBP21.67■■□□□ 1.06
HLA-B-250ENST00000434333 HOXD13P35453 343 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 FCHO2Q0JRZ9 810 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 ITIH5Q86UX2 942 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 ARID3BQ8IVW6 561 aaPredicted RBP21.67■■□□□ 1.06
HLA-B-250ENST00000434333 GPD1LQ8N335 351 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 PDCL2Q8N4E4 241 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 SPPL2BQ8TCT7 592 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 C2orf15Q8WU43 125 aaKnown RBP21.67■■□□□ 1.06
HLA-B-250ENST00000434333 E2F7Q96AV8 911 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 ZNF396Q96N95 335 aaPredicted RBP21.67■■□□□ 1.06
HLA-B-250ENST00000434333 LRRC3BQ96PB8 259 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 ATXN3LQ9H3M9 355 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 CUEDC2Q9H467 287 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 TMLHEQ9NVH6 421 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 SIX4Q9UIU6 781 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 FBXO4Q9UKT5 387 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 L1RE1Q9UN81 338 aa21.67■■□□□ 1.06
HLA-B-250ENST00000434333 MRPS17Q9Y2R5 130 aaKnown RBP21.67■■□□□ 1.06
HLA-B-250ENST00000434333 PTPRJQ12913 1337 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms