RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ERCC5P28715 1186 aaPredicted RBP16.64■□□□□ 0.25
TREX1-201ENST00000433541 MTIF2P46199 727 aaKnown RBP16.64■□□□□ 0.25
TREX1-201ENST00000433541 CDR1P51861 262 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 ENPEPQ07075 957 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 CETN1Q12798 172 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 MRPL58Q14197 206 aaKnown RBP16.64■□□□□ 0.25
TREX1-201ENST00000433541 COL19A1Q14993 1142 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 SKOR2Q2VWA4 1001 aaPredicted RBP16.64■□□□□ 0.25
TREX1-201ENST00000433541 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 HSP90AA4PQ58FG1 418 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 WDR44Q5JSH3 913 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 C1orf220Q5T0J3 134 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 SLC8B1Q6J4K2 584 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 TMEM184AQ6ZMB5 413 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 RBM43Q6ZSC3 357 aaKnown RBP16.64■□□□□ 0.25
TREX1-201ENST00000433541 CCDC149Q6ZUS6 474 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 FAM114A1Q8IWE2 563 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 SLC7A14Q8TBB6 771 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 ELMO3Q96BJ8 720 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 CNOT6LQ96LI5 555 aaKnown RBP16.64■□□□□ 0.25
TREX1-201ENST00000433541 PI4K2AQ9BTU6 479 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 CYP4F11Q9HBI6 524 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 DDX43Q9NXZ2 648 aaKnown RBP16.64■□□□□ 0.25
TREX1-201ENST00000433541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.64■□□□□ 0.25
TREX1-201ENST00000433541 MYH10P35580 1976 aa16.64■□□□□ 0.25
TREX1-201ENST00000433541 WDR27A2RRH5 827 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 C8AP07357 584 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
TREX1-201ENST00000433541 PCSK1P29120 753 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 LHX1P48742 406 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 ADCY1Q08828 1119 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 SMAD4Q13485 552 aaKnown RBP16.63■□□□□ 0.25
TREX1-201ENST00000433541 KCNC3Q14003 757 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 SOWAHAQ2M3V2 549 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 PUS10Q3MIT2 529 aaKnown RBP16.63■□□□□ 0.25
TREX1-201ENST00000433541 DCP1BQ8IZD4 617 aaKnown RBP16.63■□□□□ 0.25
TREX1-201ENST00000433541 FBXL13Q8NEE6 735 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 OR6B3Q8NGW1 331 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 ZNF461Q8TAF7 563 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 TAS1R2Q8TE23 839 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 BORCS6Q96GS4 357 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 ASB2Q96Q27 587 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 FBXW11Q9UKB1 542 aa16.63■□□□□ 0.25
TREX1-201ENST00000433541 CCDC195A0A1B0GUA6 201 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 PES1O00541 588 aaKnown RBP16.62■□□□□ 0.25
TREX1-201ENST00000433541 N4BP1O75113 896 aaKnown RBP16.62■□□□□ 0.25
TREX1-201ENST00000433541 RFPL2O75678 378 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
TREX1-201ENST00000433541 LRG1P02750 347 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 WEE2P0C1S8 567 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 NOP14P78316 857 aaKnown RBP16.62■□□□□ 0.25
TREX1-201ENST00000433541 ITIH3Q06033 890 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 TYRO3Q06418 890 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 TPGS2Q68CL5 300 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 SPOPLQ6IQ16 392 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 SYCE2Q6PIF2 218 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 RNF19BQ6ZMZ0 732 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 DPH6Q7L8W6 267 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 SMRP1Q8NCR6 262 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 TAF4BQ92750 862 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 MSLNLQ96KJ4 702 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 RIPOR3Q96MK2 946 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 TMEM209Q96SK2 561 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 NAT10Q9H0A0 1025 aaKnown RBP16.62■□□□□ 0.25
TREX1-201ENST00000433541 DNAJC25Q9H1X3 360 aa16.62■□□□□ 0.25
TREX1-201ENST00000433541 USP15Q9Y4E8 981 aaPredicted RBP16.62■□□□□ 0.25
TREX1-201ENST00000433541 MBTPS2O43462 519 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 ZMYND10O75800 440 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 STAU1O95793 577 aaKnown RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 PDGFRBP09619 1106 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 ATF2P15336 505 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 TRIM21P19474 475 aaKnown RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 RAP1GAPP47736 663 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 FMO5P49326 533 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 CT47A1Q5JQC4 288 aaPredicted RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 CBWD3Q5JTY5 395 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 CBWD5Q5RIA9 395 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 ATAT1Q5SQI0 421 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 LILRA6Q6PI73 481 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 C15orf39Q6ZRI6 1047 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 C11orf57Q6ZUT1 292 aaPredicted RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 ELMOD1Q8N336 334 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 OR10T2Q8NGX3 314 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 HDAC7Q8WUI4 952 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 SMG7Q92540 1137 aaKnown RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 XYLT2Q9H1B5 865 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 SMYD3Q9H7B4 428 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 RAB20Q9NX57 234 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 ZDHHC7Q9NXF8 308 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 AFF4Q9UHB7 1163 aaKnown RBP16.61■□□□□ 0.25
TREX1-201ENST00000433541 NFE2L3Q9Y4A8 694 aa16.61■□□□□ 0.25
TREX1-201ENST00000433541 SYCE3A1L190 88 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 A8MXQ7 604 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 CCL16O15467 120 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 TBC1D4O60343 1298 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms