RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 VN1R2Q8NFZ6 395 aa19.75■□□□□ 0.75
RFTN1-202ENST00000431547 RTP3Q9BQQ7 232 aa19.75■□□□□ 0.75
RFTN1-202ENST00000431547 APOBEC3GQ9HC16 384 aaKnown RBP19.75■□□□□ 0.75
RFTN1-202ENST00000431547 POLIQ9UNA4 740 aa19.75■□□□□ 0.75
RFTN1-202ENST00000431547 HCFC2Q9Y5Z7 792 aa19.75■□□□□ 0.75
RFTN1-202ENST00000431547 LINC01565O15544 149 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 GLUD1P00367 558 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 PRKCSHP14314 528 aaPredicted RBP19.74■□□□□ 0.75
RFTN1-202ENST00000431547 ZNF18P17022 549 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 WARSP23381 471 aaKnown RBP19.74■□□□□ 0.75
RFTN1-202ENST00000431547 NOP14P78316 857 aaKnown RBP19.74■□□□□ 0.75
RFTN1-202ENST00000431547 IQCB1Q15051 598 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 SKIV2LQ15477 1246 aaKnown RBP19.74■□□□□ 0.75
RFTN1-202ENST00000431547 SPOPLQ6IQ16 392 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 GLYCTKQ8IVS8 523 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 ZNF461Q8TAF7 563 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 HDAC7Q8WUI4 952 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 KBTBD7Q8WVZ9 684 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 ELMO3Q96BJ8 720 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 ACBD6Q9BR61 282 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 HSD3B7Q9H2F3 369 aa19.74■□□□□ 0.75
RFTN1-202ENST00000431547 DDX43Q9NXZ2 648 aaKnown RBP19.74■□□□□ 0.75
RFTN1-202ENST00000431547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.73■□□□□ 0.75
RFTN1-202ENST00000431547 TGM5O43548 720 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 ABLIM3O94929 683 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 CLSTN1O94985 981 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 GLP2RO95838 553 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 SRGAP2BP0DMP2 458 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 EPCAMP16422 314 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 ASPAP45381 313 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 ROR1Q01973 937 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 VWA3BQ502W6 1294 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 MIIPQ5JXC2 388 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 TPGS2Q68CL5 300 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 OSTM1Q86WC4 334 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 EHBP1Q8NDI1 1231 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 OR10T2Q8NGX3 314 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 LMO3Q8TAP4 145 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 CASP10Q92851 521 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 MRPL45Q9BRJ2 306 aaKnown RBP19.73■□□□□ 0.75
RFTN1-202ENST00000431547 BCO2Q9BYV7 579 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 NIF3L1Q9GZT8 377 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 ZCWPW1Q9H0M4 648 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 NDST4Q9H3R1 872 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 CYP3A43Q9HB55 503 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 CLDND1Q9NY35 253 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 DPP7Q9UHL4 492 aa19.73■□□□□ 0.75
RFTN1-202ENST00000431547 GTPBP10A4D1E9 387 aaKnown RBP19.72■□□□□ 0.75
RFTN1-202ENST00000431547 LRRC10BA6NIK2 292 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 BECN2A8MW95 431 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 CDK11BP21127 795 aaKnown RBP19.72■□□□□ 0.75
RFTN1-202ENST00000431547 PCSK1P29120 753 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 GNL1P36915 607 aaPredicted RBP19.72■□□□□ 0.75
RFTN1-202ENST00000431547 LTBRP36941 435 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 ARPP19P56211 112 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 RBM10P98175 930 aaKnown RBP19.72■□□□□ 0.75
RFTN1-202ENST00000431547 GPR17Q13304 367 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 LLGL2Q6P1M3 1020 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 LRSAM1Q6UWE0 723 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 TATDN2Q93075 761 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 HLA-CQ95604 372 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 SNX25Q9H3E2 840 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 PLEKHA4Q9H4M7 779 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 SMYD3Q9H7B4 428 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 CBX8Q9HC52 389 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.72■□□□□ 0.752e-9■■■■■ 223.6
RFTN1-202ENST00000431547 LIMA1Q9UHB6 759 aaKnown RBP19.72■□□□□ 0.75
RFTN1-202ENST00000431547 MAFFQ9ULX9 164 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 COG5Q9UP83 839 aa19.72■□□□□ 0.75
RFTN1-202ENST00000431547 PRRC2BQ5JSZ5 2229 aaKnown RBP19.72■□□□□ 0.75
RFTN1-202ENST00000431547 SCN1AP35498 2009 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 WDR27A2RRH5 827 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 CPB1P15086 417 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 ATF2P15336 505 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 LMO2P25791 158 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 CDH8P55286 799 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 KRT31Q15323 416 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 ELMSAN1Q6PJG2 1045 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 KREMEN2Q8NCW0 462 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 ANKRD20A12PQ8NF67 263 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 TMEM209Q96SK2 561 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 SDCBP2Q9H190 292 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 FAM124BQ9H5Z6 455 aaPredicted RBP19.71■□□□□ 0.75
RFTN1-202ENST00000431547 UBE2ZQ9H832 354 aaPredicted RBP19.71■□□□□ 0.75
RFTN1-202ENST00000431547 DZANK1Q9NVP4 752 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 CLEC1BQ9P126 229 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 AFF4Q9UHB7 1163 aaKnown RBP19.71■□□□□ 0.75
RFTN1-202ENST00000431547 FBXW11Q9UKB1 542 aa19.71■□□□□ 0.75
RFTN1-202ENST00000431547 WEE2P0C1S8 567 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 OR4Q2P0C623 313 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 SPATA31D3P0C874 917 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 HOXB8P17481 243 aaPredicted RBP19.7■□□□□ 0.74
RFTN1-202ENST00000431547 ZNF445P59923 1031 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 TSPY1Q01534 308 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 DLX2Q07687 328 aaPredicted RBP19.7■□□□□ 0.74
RFTN1-202ENST00000431547 SMARCB1Q12824 385 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 SCARA5Q6ZMJ2 495 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 GBP6Q6ZN66 633 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 SPATA31D4Q6ZUB0 917 aa19.7■□□□□ 0.74
RFTN1-202ENST00000431547 RTL10Q7L3V2 364 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms