RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ALCAMQ13740 583 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ZACNQ401N2 412 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 CES4AQ5XG92 561 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ZNF449Q6P9G9 518 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 TRABD2AQ86V40 505 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 GPD1LQ8N335 351 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 SUPT20HQ8NEM7 779 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 DENND1AQ8TEH3 1009 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ERP27Q96DN0 273 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 BICD1Q96G01 975 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 MCEEQ96PE7 176 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 KIAA1683Q9H0B3 1180 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 SLC17A7Q9P2U7 560 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 SUFUQ9UMX1 484 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 C15orf41Q9Y2V0 281 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 COL2A1P02458 1487 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-202ENST00000430711 PIK3R2O00459 728 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 TLR3O15455 904 aaKnown RBP7.59□□□□□ -1.19
COL28A1-202ENST00000430711 LIASO43766 372 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 ITIH2P19823 946 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 MUTP22033 750 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 ADRA1DP25100 572 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 EPHB2P29323 1055 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 PIK3CAP42336 1068 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 RAP1GAPP47736 663 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 MCCD1P59942 119 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-202ENST00000430711 CETN1Q12798 172 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 GPS1Q13098 491 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 MOGSQ13724 837 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 MTFR1Q15390 333 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 PPP2R5EQ16537 467 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 CCDC142Q17RM4 750 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 ARMC9Q7Z3E5 817 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 OGFOD1Q8N543 542 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 ZNF276Q8N554 614 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 EMC1Q8N766 993 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 ANKS4BQ8N8V4 417 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 RBBP8NLQ8NC74 664 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-202ENST00000430711 RFWD2Q8NHY2 731 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 JOSD2Q8TAC2 188 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM174Q8WUU8 243 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 SLC7A6OSQ96CW6 309 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-202ENST00000430711 FAXDC2Q96IV6 333 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 SLITRK1Q96PX8 696 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 MIPEPQ99797 713 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 DEFB129Q9H1M3 183 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 RPAP3Q9H6T3 665 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-202ENST00000430711 SLC24A3Q9HC58 644 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 PARP2Q9UGN5 583 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 FBXO40Q9UH90 709 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 LGALS13Q9UHV8 139 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 PCDHB4Q9Y5E5 795 aa7.59□□□□□ -1.19
COL28A1-202ENST00000430711 SIP14410 1827 aa7.59□□□□□ -1.2
COL28A1-202ENST00000430711 TCRBV5S1A1TA0A578 114 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 WDR64B1ANS9 1081 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 E5RJQ4 531 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 H0Y3Z8 333 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 PMM2O15305 246 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 FAM155BO75949 473 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TMEM63AO94886 807 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GSTA1P08263 222 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 WEE2P0C1S8 567 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GNA15P30679 374 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GTF2H1P32780 548 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 MSH2P43246 934 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 NSFP46459 744 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GCLCP48506 637 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ARSEP51690 589 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 CLNS1AP54105 237 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GCNT1Q02742 428 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 NFX1Q12986 1120 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 CUL2Q13617 745 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TFDP1Q14186 410 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 SH3PXD2AQ5TCZ1 1133 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GSTA5Q7RTV2 222 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TMEM192Q8IY95 271 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ZBED8Q8IZ13 594 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 SAMD3Q8N6K7 520 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 CEP120Q8N960 986 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ATL2Q8NHH9 583 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GIMAP7Q8NHV1 300 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 MIEF2Q96C03 454 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TRAIPQ9BWF2 469 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 MOV10L1Q9BXT6 1211 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF395Q9H8N7 513 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ATP6V0A4Q9HBG4 840 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ETNK1Q9HBU6 452 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 HOMER3Q9NSC5 361 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 C1orf112Q9NSG2 853 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ARHGAP28Q9P2N2 729 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 HMGXB4Q9UGU5 601 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ARL2BPQ9Y2Y0 163 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 CNTNAP2Q9UHC6 1331 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 EXOC1LA0A1B0GW35 172 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 C3orf70A6NLC5 250 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 PEX11AO75192 247 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ENTPD5O75356 428 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms