RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 ADSSL1Q8N142 457 aa17.59■□□□□ 0.41
PTPRA-206ENST00000430705 LINC00301Q8NCQ3 95 aa17.59■□□□□ 0.41
PTPRA-206ENST00000430705 CLDN23Q96B33 292 aa17.59■□□□□ 0.41
PTPRA-206ENST00000430705 LRRC3BQ96PB8 259 aa17.59■□□□□ 0.41
PTPRA-206ENST00000430705 LPIN3Q9BQK8 851 aa17.59■□□□□ 0.41
PTPRA-206ENST00000430705 PYM1Q9BRP8 204 aaKnown RBP17.59■□□□□ 0.41
PTPRA-206ENST00000430705 CBWD1Q9BRT8 395 aa17.59■□□□□ 0.41
PTPRA-206ENST00000430705 FAM213AQ9BRX8 229 aa17.59■□□□□ 0.41
PTPRA-206ENST00000430705 CYB561D2O14569 222 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 PAX3P23760 479 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 GDI1P31150 447 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 PLD1Q13393 1074 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 CCDC73Q6ZRK6 1079 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 PDILTQ8N807 584 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 C1orf127Q8N9H9 656 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 HPS3Q969F9 1004 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 PSMG2Q969U7 264 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 ACCSQ96QU6 501 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 TRMT61BQ9BVS5 477 aaKnown RBP17.58■□□□□ 0.4
PTPRA-206ENST00000430705 BRD9Q9H8M2 597 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 IL21Q9HBE4 155 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 TMLHEQ9NVH6 421 aa17.58■□□□□ 0.4
PTPRA-206ENST00000430705 PTPRJQ12913 1337 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 GOLGA8IPA6NC78 632 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 GOLGA8JA6NMD2 632 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 HEPACAM2A8MVW5 462 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
PTPRA-206ENST00000430705 IL18RAPO95256 599 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 IDEP14735 1019 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 PSMC3P17980 439 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 HOXD13P35453 343 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 EPHB3P54753 998 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 CCDC142Q17RM4 750 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 WDR44Q5JSH3 913 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 DNAJB7Q7Z6W7 309 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-206ENST00000430705 GPIHBP1Q8IV16 184 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 BCO2Q9BYV7 579 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 ZSCAN16Q9H4T2 348 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-206ENST00000430705 PANK4Q9NVE7 773 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 SPATA6Q9NWH7 488 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-206ENST00000430705 HSFX1Q9UBD0 423 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 DENND4CQ5VZ89 1909 aa17.57■□□□□ 0.4
PTPRA-206ENST00000430705 OTOGLQ3ZCN5 2332 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 KPNA7A9QM74 516 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 PRAMEF12O95522 483 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 ITGB3P05106 788 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 GARTP22102 1010 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 POLR2BP30876 1174 aaKnown RBP17.56■□□□□ 0.4
PTPRA-206ENST00000430705 RPS9P46781 194 aaKnown RBP17.56■□□□□ 0.4
PTPRA-206ENST00000430705 ALDH1A3P47895 512 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 POSTNQ15063 836 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 ARMCX5Q6P1M9 558 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 NT5DC4Q86YG4 428 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 MFSD6LQ8IWD5 586 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 STKLD1Q8NE28 680 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 DEPDC1BQ8WUY9 529 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 SEPT5Q99719 369 aaPredicted RBP17.56■□□□□ 0.4
PTPRA-206ENST00000430705 TRPV5Q9NQA5 729 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 PRMT8Q9NR22 394 aaPredicted RBP17.56■□□□□ 0.4
PTPRA-206ENST00000430705 RBAKQ9NYW8 714 aaPredicted RBP17.56■□□□□ 0.4
PTPRA-206ENST00000430705 SIX4Q9UIU6 781 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 DSEQ9UL01 958 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 L1RE1Q9UN81 338 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 EXOC7Q9UPT5 735 aa17.56■□□□□ 0.4
PTPRA-206ENST00000430705 GABRR2P28476 465 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 CYP4F8P98187 520 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 TFAMQ00059 246 aaKnown RBP17.55■□□□□ 0.4
PTPRA-206ENST00000430705 FCHO2Q0JRZ9 810 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 STK38Q15208 465 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 SV2CQ496J9 727 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 SHC4Q6S5L8 630 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 ZNF852Q6ZMS4 543 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 TMEM150AQ86TG1 271 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 OSTM1Q86WC4 334 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 NELL1Q92832 810 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 IRF7Q92985 503 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 PKMYT1Q99640 499 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 PCIF1Q9H4Z3 704 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 SLITRK6Q9H5Y7 841 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 KBTBD4Q9NVX7 518 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 TFIP11Q9UBB9 837 aaKnown RBP17.55■□□□□ 0.4
PTPRA-206ENST00000430705 FBXO4Q9UKT5 387 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 NDRG2Q9UN36 371 aaKnown RBP17.55■□□□□ 0.4
PTPRA-206ENST00000430705 ASB3Q9Y575 518 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 PCDHB13Q9Y5F0 798 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 PIAS3Q9Y6X2 628 aa17.55■□□□□ 0.4
PTPRA-206ENST00000430705 SPTLC2O15270 562 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 HCRTO43612 131 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 EXTL3O43909 919 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 PPP6R2O75170 966 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 LMNAP02545 664 aaKnown RBP17.54■□□□□ 0.4
PTPRA-206ENST00000430705 HAPLN1P10915 354 aaPredicted RBP17.54■□□□□ 0.4
PTPRA-206ENST00000430705 TDGF1P13385 188 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 MAGEA9P43362 315 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 GPR15P49685 360 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 MTAPQ13126 283 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 ALCAMQ13740 583 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 ZNF528Q3MIS6 628 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 MGAT5BQ3V5L5 792 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms