RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 MMP13P45452 471 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ALDH5A1P51649 535 aaPredicted RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 RNASELQ05823 741 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 CYP24A1Q07973 514 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 TNFAIP1Q13829 316 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 RCN2Q14257 317 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 CLEC16AQ2KHT3 1053 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 GNPTABQ3T906 1256 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 MDH1BQ5I0G3 518 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 ANO5Q75V66 913 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ERICH1Q86X53 443 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.5□□□□□ -1.05
HPS4-205ENST00000429411 EMC1Q8N766 993 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 CCT6BQ92526 530 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 SHC3Q92529 594 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 MCUR1Q96AQ8 359 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 JPH1Q9HDC5 661 aaPredicted RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 ARL2BPQ9Y2Y0 163 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 A0A0C4DFX4 3053 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 DDX60LQ5H9U9 1706 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 UBE4BO95155 1302 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 H7C0C1 242 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 SLC26A4O43511 780 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 SNX3O60493 162 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 UPP2O95045 317 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 NUDT17P0C025 328 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 KITP10721 976 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ABL2P42684 1182 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ATP5OP48047 213 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 PEX5P50542 639 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 NCOA4Q13772 614 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 PGM5Q15124 567 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ZBTB41Q5SVQ8 909 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 CASC4Q6P4E1 433 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 NCAPG2Q86XI2 1143 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 VPS52Q8N1B4 723 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 LRRC71Q8N4P6 559 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 TMEM161BQ8NDZ6 487 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 SREK1Q8WXA9 508 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 TLCD1Q96CP7 247 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 LRRC37BQ96QE4 947 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 DCLK3Q9C098 648 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 PCYOX1Q9UHG3 505 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 RIPK3Q9Y572 518 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 MAD1L1Q9Y6D9 718 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 LTBP3Q9NS15 1303 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 CCDC195A0A1B0GUA6 201 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 CFAP69A5D8W1 941 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 F8VP50 259 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ANP32DO95626 131 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 RPS12P25398 132 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 GCLCP48506 637 aaPredicted RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 VEGFBP49765 207 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 SPARCL1Q14515 664 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 FASTKD3Q14CZ7 662 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 TAF11Q15544 211 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 PKN2Q16513 984 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 SUPT20HL1Q3ZLR7 823 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 FAXCQ5TGI0 409 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ANKRD20A3Q5VUR7 823 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 DPY19L2P1Q6NXN4 242 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 MFSD7Q6UXD7 560 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 YTHDF3Q7Z739 585 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 ZC3H3Q8IXZ2 948 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 CRYGNQ8WXF5 182 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 CFAP36Q96G28 342 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 MOV10L1Q9BXT6 1211 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 SLC9A2Q9UBY0 812 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 NOCTQ9UK39 431 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 AGAP1Q9UPQ3 857 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 HEY1Q9Y5J3 304 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 UMODL1Q5DID0 1318 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 SYNJ2BP-COX16A0A087WUM0 186 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 TJP3O95049 919 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 SSTR1P30872 391 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 MAN1A1P33908 653 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 POU5F1Q01860 360 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 NFX1Q12986 1120 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 PPP2R5DQ14738 602 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 PCNX4Q63HM2 1172 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 BTNL9Q6UXG8 535 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 GADL1Q6ZQY3 521 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 CENPUQ71F23 418 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 EIF1ADQ8N9N8 165 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 KCTD6Q8NC69 237 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 MCPH1Q8NEM0 835 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 LMO3Q8TAP4 145 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 ART4Q93070 314 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 WNK4Q96J92 1243 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 HERPUD2Q9BSE4 406 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 UBN1Q9NPG3 1134 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.49□□□□□ -1.05
HPS4-205ENST00000429411 COX16Q9P0S2 106 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 SUFUQ9UMX1 484 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 CHMP2BQ9UQN3 213 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 TNRC6CQ9HCJ0 1690 aaKnown RBP8.49□□□□□ -1.05
HPS4-205ENST00000429411 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
HPS4-205ENST00000429411 P4HA2O15460 535 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms