RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 GTF3C4Q9UKN8 822 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 ALDH18A1P54886 795 aaKnown RBP13.36□□□□□ -0.27
LDB3-205ENST00000429277 VSNL1P62760 191 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 KHDRBS2Q5VWX1 349 aaKnown RBP13.36□□□□□ -0.27
LDB3-205ENST00000429277 JAMLQ86YT9 394 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 AGBL3Q8NEM8 1001 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 SPATA18Q8TC71 538 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 HPS3Q969F9 1004 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 KLC4Q9NSK0 619 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 CD274Q9NZQ7 290 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 FAM200BP0CF97 657 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 STAG3L1P0CL83 205 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 RASA1P20936 1047 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 RGS7P49802 495 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 SREBF2Q12772 1141 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 TRIM60Q495X7 471 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 AARS2Q5JTZ9 985 aaKnown RBP13.36□□□□□ -0.27
LDB3-205ENST00000429277 CCNI2Q6ZMN8 369 aaPredicted RBP13.36□□□□□ -0.27
LDB3-205ENST00000429277 FAR2Q96K12 515 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 AGAP3Q96P47 875 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 ERGIC2Q96RQ1 377 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 BATF3Q9NR55 127 aa13.36□□□□□ -0.27
LDB3-205ENST00000429277 C20orf96Q9NUD7 363 aaPredicted RBP13.36□□□□□ -0.27
LDB3-205ENST00000429277 COPG1Q9Y678 874 aaKnown RBP13.36□□□□□ -0.27
LDB3-205ENST00000429277 EVPLLA8MZ36 301 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 GYS2P54840 703 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ARL8AQ96BM9 186 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
LDB3-205ENST00000429277 SOAT2O75908 522 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 PDHA1P08559 390 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 WEE2P0C1S8 567 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 GTF2H1P32780 548 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ALDH1A3P47895 512 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 HPCAP84074 193 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 CACNB2Q08289 660 aaPredicted RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 TJAP1Q5JTD0 557 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 CCDC126Q96EE4 140 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ATXN7L3BQ96GX2 97 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 PRMT1Q99873 361 aaKnown RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 CARD9Q9H257 536 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 PSTPIP1O43586 416 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 MAGEA4P43358 317 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 KCNK10P57789 538 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 SLC30A5Q8TAD4 765 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 DOLKQ9UPQ8 538 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ZNF609O15014 1411 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 PTPRUQ92729 1446 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 NPHP3-ACAD11A0A0J9YXS1 232 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 PJA2O43164 708 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 HOXA2O43364 376 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 F9P00740 461 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ENO1P06733 434 aaKnown RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 ODC1P11926 461 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 CHN1P15882 459 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 PTGER2P43116 358 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 GEMP55040 296 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 E4F1Q66K89 784 aaPredicted RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 FBXO33Q7Z6M2 555 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ANKRD13AQ8IZ07 590 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 XPO6Q96QU8 1125 aaKnown RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 NUDT12Q9BQG2 462 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ISCUQ9H1K1 167 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 SFMBT1Q9UHJ3 866 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 FHOD1Q9Y613 1164 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 ADGRB3O60242 1522 aa13.35□□□□□ -0.27
LDB3-205ENST00000429277 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
LDB3-205ENST00000429277 SYNDIG1LA6NDD5 238 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 H7C4K7 107 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 CAMTA2O94983 1202 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 RBP3P10745 1247 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 CYP11B2P19099 503 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 GNL1P36915 607 aaPredicted RBP13.34□□□□□ -0.27
LDB3-205ENST00000429277 E2F4Q16254 413 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 ADCK2Q7Z695 626 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 WDR24Q96S15 920 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 ERP44Q9BS26 406 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
LDB3-205ENST00000429277 S100A5P33763 92 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 HSPA13P48723 471 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 KDSRQ06136 332 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 RUNX1T1Q06455 604 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 FAM83EQ2M2I3 478 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 EFCAB12Q6NXP0 572 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 MMGT1Q8N4V1 131 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 NAT9Q9BTE0 207 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 COLEC11Q9BWP8 271 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 GPR75-ASB3A0A0A6YYF3 556 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 SUPT3HB4E1H0 165 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 EGFRP00533 1210 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 MYBP10242 640 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 PRKCQQ04759 706 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 STK4Q13043 487 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 TP53BP2Q13625 1128 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 KLHDC7AQ5VTJ3 777 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms