RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 LDHDQ86WU2 507 aa11.33□□□□□ -0.59
ATP2C1-204ENST00000428331 RELL1Q8IUW5 271 aa11.33□□□□□ -0.59
ATP2C1-204ENST00000428331 CERS5Q8N5B7 392 aa11.33□□□□□ -0.59
ATP2C1-204ENST00000428331 ZDHHC15Q96MV8 337 aa11.33□□□□□ -0.59
ATP2C1-204ENST00000428331 KLF6Q99612 283 aaPredicted RBP11.33□□□□□ -0.59
ATP2C1-204ENST00000428331 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.59
ATP2C1-204ENST00000428331 DDX56Q9NY93 547 aaKnown RBP11.33□□□□□ -0.59
ATP2C1-204ENST00000428331 A6NHS1 94 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 ARHGAP42A6NI28 874 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 COPEO14579 308 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 CALB1P05937 261 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 CETPP11597 493 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 CUL3Q13618 768 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 SLC1A5Q15758 541 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 NBPF20Q3BBV1 942 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 PRUNE1Q86TP1 453 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 HELQQ8TDG4 1101 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 VPS11Q9H270 941 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 GPRC5CQ9NQ84 441 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 NDE1Q9NXR1 346 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 C2CD2Q9Y426 696 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 THOC5Q13769 683 aaKnown RBP11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 SPDYAQ5MJ70 313 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 ENDOVQ8N8Q3 282 aaKnown RBP11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 TCP10LQ8TDR4 215 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 C10orf82Q8WW14 230 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 NMRK1Q9NWW6 199 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 COL4A1P02462 1669 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 WDR64B1ANS9 1081 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 B2RBV5 119 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 ALOX15BO15296 676 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 OPHN1O60890 802 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 VIL1P09327 827 aaKnown RBP11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 JAK3P52333 1124 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 DAW1Q8N136 415 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 TCHPQ9BT92 498 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 ZMYND8Q9ULU4 1186 aaPredicted RBP11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 DOT1LQ8TEK3 1739 aa11.33□□□□□ -0.6
ATP2C1-204ENST00000428331 STAM2O75886 525 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 POLR2BP30876 1174 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 ABCD1P33897 745 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 CACNA2D1P54289 1103 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 CFAP157Q5JU67 520 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 PPIL6Q8IXY8 311 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 PAFAH2Q99487 392 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 PCDH9Q9HC56 1237 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 METTL5Q9NRN9 209 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 KRT37O76014 449 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 ZSCAN5DPP0CG00 497 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 GNAZP19086 355 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 TBXAS1P24557 533 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 ABL2P42684 1182 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 SERPINB4P48594 390 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 TMPRSS15P98073 1019 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 CGB2Q6NT52 195 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 ST13P4Q8IZP2 240 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 TMEM35BQ8NCS4 154 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 C8orf37Q96NL8 207 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 TTC1Q99614 292 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 TESPA1A2RU30 521 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 LIASO43766 372 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 UPP2O95045 317 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 PSMG1O95456 288 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 HLA-DRAP01903 254 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 VCPP55072 806 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 IRX4P78413 519 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 CYP24A1Q07973 514 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 MOGSQ13724 837 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 SGSM1Q2NKQ1 1148 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 C1orf146Q5VVC0 180 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 OLIG1Q8TAK6 271 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 TDRD3Q9H7E2 651 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 A0A1W2PPM1 405 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 A8MXQ7 604 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 SMAPO00193 183 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 SERPINB3P29508 390 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 MAP7Q14244 749 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 CRY2Q49AN0 593 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 ATP6V0A1Q93050 837 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 UTP4Q969X6 686 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 FHDC1Q9C0D6 1143 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 WWP1Q9H0M0 922 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 LNPEPQ9UIQ6 1025 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 COQ4Q9Y3A0 265 aa11.32□□□□□ -0.6
ATP2C1-204ENST00000428331 MCF2LO15068 1137 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms