RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 NRDCO43847 1150 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 C1RP00736 705 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 SOD2P04179 222 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-215ENST00000427487 APBA1Q02410 837 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 KRT17Q04695 432 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 PTK2Q05397 1052 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 SMARCB1Q12824 385 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 USP41Q3LFD5 358 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 SPOUT1Q5T280 376 aaKnown RBP12.87□□□□□ -0.35
HDLBP-215ENST00000427487 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 GJB7Q6PEY0 223 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 KBTBD7Q8WVZ9 684 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 KAT5Q92993 513 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 ARID3AQ99856 593 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 SMYD3Q9H7B4 428 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 POLIQ9UNA4 740 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 STXBP5LQ9Y2K9 1186 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 OR6C75A6NL08 312 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 H7C4K7 107 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 SERPING1P05155 500 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 ITGB1P05556 798 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 WEE2P0C1S8 567 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 BRCC3P46736 316 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 SMAD3P84022 425 aaKnown RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 CREMQ03060 361 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 YWHAHQ04917 246 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 MAPRE1Q15691 268 aaKnown RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 HS1BP3Q53T59 392 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 WSCD1Q658N2 575 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 OVOS1Q6IE37 1185 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 TMEM270Q6UE05 265 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 CCDC186Q7Z3E2 898 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 TMTC1Q8IUR5 882 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 THEM5Q8N1Q8 247 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 WHAMMQ8TF30 809 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 PIK3R5Q8WYR1 880 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 HERC2P3Q9BVR0 1158 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 GPR62Q9BZJ7 368 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 SDCBP2Q9H190 292 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 SNX25Q9H3E2 840 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 AJAP1Q9UKB5 411 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-215ENST00000427487 CDH9Q9ULB4 789 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 PCDHB4Q9Y5E5 795 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
HDLBP-215ENST00000427487 TSC2P49815 1807 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 KIAA1671Q9BY89 1806 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 RBAK-RBAKDNI3L0D1 243 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 MED7O43513 233 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 TBC1D4O60343 1298 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 CLSTN1O94985 981 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 VDRP11473 427 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 CLCN1P35523 988 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 RAD23BP54727 409 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
HDLBP-215ENST00000427487 CDH8P55286 799 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 ERVK-21P61565 698 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 DSG1Q02413 1049 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 ASIC2Q16515 512 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 FAM171A1Q5VUB5 890 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 ARHGAP17Q68EM7 881 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 PDE12Q6L8Q7 609 aaKnown RBP12.85□□□□□ -0.35
HDLBP-215ENST00000427487 ZNF280DQ6N043 979 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 CYP26C1Q6V0L0 522 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 SCARA5Q6ZMJ2 495 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 CCDC170Q8IYT3 715 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 TMEM130Q8N3G9 435 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 SLC4A11Q8NBS3 891 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 RBBP8NLQ8NC74 664 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-215ENST00000427487 OR6B3Q8NGW1 331 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 EPS8L1Q8TE68 723 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 TGS1Q96RS0 853 aaKnown RBP12.85□□□□□ -0.35
HDLBP-215ENST00000427487 MRPL45Q9BRJ2 306 aaKnown RBP12.85□□□□□ -0.35
HDLBP-215ENST00000427487 C11orf84Q9BUA3 381 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-215ENST00000427487 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 CACNG4Q9UBN1 327 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 IRAK3Q9Y616 596 aa12.85□□□□□ -0.35
HDLBP-215ENST00000427487 A8MXQ7 604 aa12.84□□□□□ -0.35
HDLBP-215ENST00000427487 FGF18O76093 207 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms