RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 SLC4A11Q8NBS3 891 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 WHAMMQ8TF30 809 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 ELOVL4Q9GZR5 314 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 PDCD11Q14690 1871 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 C17orf102A2RUQ5 167 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 MYADML2A6NDP7 307 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 MED7O43513 233 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 CILPO75339 1184 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 PAEPP09466 180 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 ECHS1P30084 290 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 RPL7AP62424 266 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 PURAQ00577 322 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 TRPV1Q8NER1 839 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 C18orf8Q96DM3 657 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 SNX27Q96L92 541 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 USTQ9Y2C2 406 aa23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 UTP11Q9Y3A2 253 aaKnown RBP23.09■■□□□ 1.29
CNEP1R1-202ENST00000427478 DAPK3O43293 454 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 C6orf222P0C671 652 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 SNX17Q15036 470 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 CYP4A22Q5TCH4 519 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 SMYD5Q6GMV2 418 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 DNAJC24Q6P3W2 148 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 ERICH1Q86X53 443 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 ZMAT2Q96NC0 199 aaKnown RBP23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 PLVAPQ9BX97 442 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 TRIM6Q9C030 488 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 ARHGAP39Q9C0H5 1083 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 NXF3Q9H4D5 531 aaKnown RBP23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 CYP3A43Q9HB55 503 aa23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 PIN4Q9Y237 131 aaKnown RBP23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.08■■□□□ 1.29
CNEP1R1-202ENST00000427478 GOLGA6BA6NDN3 693 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 O00370 1275 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 PTPN11Q06124 597 aaPredicted RBP23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 C7orf31Q8N865 590 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 MAGOHBQ96A72 148 aaKnown RBP23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 TMEM176AQ96HP8 235 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 MCEEQ96PE7 176 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 APOL6Q9BWW8 343 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 DPH5Q9H2P9 285 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 PLEKHA5Q9HAU0 1116 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 MED4Q9NPJ6 270 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 MTUS1Q9ULD2 1270 aa23.08■■□□□ 1.28
CNEP1R1-202ENST00000427478 SCN1AP35498 2009 aa23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 CHRNA3P32297 505 aa23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 GGCXP38435 758 aa23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 YARSP54577 528 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 TAS2R40P59535 323 aa23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 PCBP1Q15365 356 aaKnown RBP eCLIP23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 FAM71BQ8TC56 605 aa23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 RIN2Q8WYP3 895 aaPredicted RBP23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 DDX27Q96GQ7 796 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 TRIM31Q9BZY9 425 aa23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 NEUROG2Q9H2A3 272 aa23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.07■■□□□ 1.28
CNEP1R1-202ENST00000427478 TCRBV5S1A1TA0A578 114 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 AGPSO00116 658 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 CA12O43570 354 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 SYF2O95926 243 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 SSR1P43307 286 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 DHX34Q14147 1143 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 SIX1Q15475 284 aaPredicted RBP23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 GLRA4Q5JXX5 417 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 EIF1ADQ8N9N8 165 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 RAB17Q9H0T7 212 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 TUBGCP4Q9UGJ1 667 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 IP6K2Q9UHH9 426 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 FAN1Q9Y2M0 1017 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 TMEM191CA6NGB0 347 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 RECQL4O94761 1208 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 STAU1O95793 577 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 RARAP10276 462 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 GJC1P36383 396 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 PTPN20Q4JDL3 420 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 TTC27Q6P3X3 843 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 PAXIP1Q6ZW49 1069 aaPredicted RBP23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 RHOT1Q8IXI2 618 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 LHX5Q9H2C1 402 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 RNF19AQ9NV58 838 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 VPS18Q9P253 973 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 CYTH4Q9UIA0 394 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 GABRQQ9UN88 632 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 DERAQ9Y315 318 aa23.06■■□□□ 1.28
CNEP1R1-202ENST00000427478 PSTPIP1O43586 416 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 DUSP11O75319 330 aaKnown RBP23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 PSMC4P43686 418 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 TM4SF4P48230 202 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 GYS2P54840 703 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 TERF2Q15554 542 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 DCUN1D2Q6PH85 259 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 JAMLQ86YT9 394 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 SEC14L1Q92503 715 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 TJP2Q9UDY2 1190 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 PPEF2O14830 753 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 AKAP5P24588 427 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 AXLP30530 894 aa23.05■■□□□ 1.28
CNEP1R1-202ENST00000427478 MAN1A1P33908 653 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms