RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TMEM265A0A087WTH1 108 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 H7C4K7 107 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 DSG1Q02413 1049 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 INCA1Q0VD86 236 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 TRIM14Q14142 442 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 MRPL58Q14197 206 aaKnown RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 GJB7Q6PEY0 223 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 SCARA5Q6ZMJ2 495 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 CACNA2D4Q7Z3S7 1137 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 UNC93AQ86WB7 457 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 KREMEN1Q96MU8 473 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 ARID3AQ99856 593 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 HERC2P3Q9BVR0 1158 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 SMYD3Q9H7B4 428 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 A0A1W2PQJ5 194 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 GLUD2P49448 558 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 GPM6BQ13491 265 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 VARS2Q5ST30 1063 aaKnown RBP16.47■□□□□ 0.23
COL11A1-204ENST00000427239 KIAA0319Q5VV43 1072 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 IQCEQ6IPM2 695 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 PDE12Q6L8Q7 609 aaKnown RBP16.47■□□□□ 0.23
COL11A1-204ENST00000427239 SPRED2Q7Z698 418 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 ZNF397Q8NF99 534 aaPredicted RBP16.47■□□□□ 0.23
COL11A1-204ENST00000427239 OR6B3Q8NGW1 331 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 KBTBD7Q8WVZ9 684 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 ARNTL2Q8WYA1 636 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 PIK3R5Q8WYR1 880 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 ACBD6Q9BR61 282 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 SDCBP2Q9H190 292 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 ZNF576Q9H609 170 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 NGRNQ9NPE2 291 aaKnown RBP16.47■□□□□ 0.23
COL11A1-204ENST00000427239 MRPL17Q9NRX2 175 aaKnown RBP16.47■□□□□ 0.23
COL11A1-204ENST00000427239 MYO6Q9UM54 1294 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 STXBP5LQ9Y2K9 1186 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 FHOD1Q9Y613 1164 aa16.47■□□□□ 0.23
COL11A1-204ENST00000427239 EPHB6O15197 1021 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 URODP06132 367 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 CTSAP10619 480 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 PCSK1P29120 753 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 CDC25BP30305 580 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 ARHGAP44Q17R89 818 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 RTP2Q5QGT7 225 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 TMC7Q7Z402 723 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.46■□□□□ 0.23
COL11A1-204ENST00000427239 FMNL3Q8IVF7 1028 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 POF1BQ8WVV4 589 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 SHC3Q92529 594 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 ANP32BQ92688 251 aaKnown RBP16.46■□□□□ 0.23
COL11A1-204ENST00000427239 KAT5Q92993 513 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 SPAG5Q96R06 1193 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 MRPL45Q9BRJ2 306 aaKnown RBP16.46■□□□□ 0.23
COL11A1-204ENST00000427239 TTYH3Q9C0H2 523 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 LMAN2LQ9H0V9 348 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 ZBP1Q9H171 429 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 CERS4Q9HA82 394 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 DDX43Q9NXZ2 648 aaKnown RBP16.46■□□□□ 0.23
COL11A1-204ENST00000427239 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 IRAK3Q9Y616 596 aa16.46■□□□□ 0.23
COL11A1-204ENST00000427239 GBF1Q92538 1859 aa16.46■□□□□ 0.22
COL11A1-204ENST00000427239 CDH23Q9H251 3354 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 A8MXQ7 604 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 CILPO75339 1184 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 TPM1P09493 284 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 CD58P19256 250 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 ACO1P21399 889 aaKnown RBP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 RAP1GAPP47736 663 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 CREMQ03060 361 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 DRAP1Q14919 205 aaPredicted RBP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 ZNF280DQ6N043 979 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 PPFIBP1Q86W92 1011 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 UBR7Q8N806 425 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 LNX1Q8TBB1 728 aaPredicted RBP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 RIN2Q8WYP3 895 aaPredicted RBP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 TNIP3Q96KP6 325 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 B3GALT6Q96L58 329 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 NUCKS1Q9H1E3 243 aaKnown RBP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 TLR9Q9NR96 1032 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 CAPN11Q9UMQ6 739 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 LUC7L2Q9Y383 392 aaKnown RBP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 BACE2Q9Y5Z0 518 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 TRIOBPQ9H2D6 2365 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 OR6C75A6NL08 312 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
COL11A1-204ENST00000427239 GRM6O15303 877 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 CXCL14O95715 111 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 LMO2P25791 158 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 NDST1P52848 882 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 CTXN3Q4LDR2 81 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 CRYBG2Q8N1P7 616 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 KIAA1257Q9ULG3 409 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 PCDHB4Q9Y5E5 795 aa16.45■□□□□ 0.22
COL11A1-204ENST00000427239 TBC1D4O60343 1298 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 LILRB3O75022 631 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 JAM2P57087 298 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 ERVFC1P60507 584 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms