RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 PRDM12Q9H4Q4 367 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 PLCB1Q9NQ66 1216 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 MTRRQ9UBK8 725 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 MFAP3P55082 362 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 ERVFC1P60507 584 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 TSPY1Q01534 308 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 SMARCB1Q12824 385 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 CUL2Q13617 745 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 CTXN3Q4LDR2 81 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 SPOPLQ6IQ16 392 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 ELMSAN1Q6PJG2 1045 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 TAS1R1Q7RTX1 841 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 UNC93AQ86WB7 457 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 PPM1KQ8N3J5 372 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 LNX1Q8TBB1 728 aaPredicted RBP25.77■■□□□ 1.72
APOE-202ENST00000425718 ACBD6Q9BR61 282 aa25.77■■□□□ 1.72
APOE-202ENST00000425718 APOBEC3GQ9HC16 384 aaKnown RBP25.77■■□□□ 1.72
APOE-202ENST00000425718 TRANK1O15050 2925 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 A0A1W2PQC6 194 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 GABRDO14764 452 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 IGFBP6P24592 240 aaPredicted RBP25.76■■□□□ 1.71
APOE-202ENST00000425718 DNAJB1P25685 340 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 GNL1P36915 607 aaPredicted RBP25.76■■□□□ 1.71
APOE-202ENST00000425718 ASPAP45381 313 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 NDUFV1P49821 464 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 FXR1P51114 621 aaKnown RBP eCLIP25.76■■□□□ 1.71
APOE-202ENST00000425718 IQCDQ96DY2 449 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 TNIP3Q96KP6 325 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 PCMTD1Q96MG8 357 aaPredicted RBP25.76■■□□□ 1.71
APOE-202ENST00000425718 RBSNQ9H1K0 784 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 NSUN3Q9H649 340 aaKnown RBP25.76■■□□□ 1.71
APOE-202ENST00000425718 DPP7Q9UHL4 492 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 POLIQ9UNA4 740 aa25.76■■□□□ 1.71
APOE-202ENST00000425718 C2orf71A6NGG8 1288 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 C2CD2LO14523 706 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 LILRB3O75022 631 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 CAMK1Q14012 370 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 MAPRE1Q15691 268 aaKnown RBP25.75■■□□□ 1.71
APOE-202ENST00000425718 SARM1Q6SZW1 724 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 SCARA5Q6ZMJ2 495 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 DCP1BQ8IZD4 617 aaKnown RBP25.75■■□□□ 1.71
APOE-202ENST00000425718 OR6B3Q8NGW1 331 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 DDX43Q9NXZ2 648 aaKnown RBP25.75■■□□□ 1.71
APOE-202ENST00000425718 FBXL5Q9UKA1 691 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 CDH9Q9ULB4 789 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 MAFFQ9ULX9 164 aa25.75■■□□□ 1.71
APOE-202ENST00000425718 BARX2Q9UMQ3 279 aaPredicted RBP25.75■■□□□ 1.71
APOE-202ENST00000425718 TIMM13Q9Y5L4 95 aaPredicted RBP25.75■■□□□ 1.71
APOE-202ENST00000425718 PRRC2BQ5JSZ5 2229 aaKnown RBP25.75■■□□□ 1.71
APOE-202ENST00000425718 NCK2O43639 380 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 SLC9A1P19634 815 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 INCA1Q0VD86 236 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 LRMPQ12912 555 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 NR1I3Q14994 352 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 SCARA3Q6AZY7 606 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 SLC8B1Q6J4K2 584 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 DEFB123Q8N688 67 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 NEK11Q8NG66 645 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 TATDN2Q93075 761 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 LSM14BQ9BX40 385 aaKnown RBP25.74■■□□□ 1.71
APOE-202ENST00000425718 SMYD3Q9H7B4 428 aa25.74■■□□□ 1.71
APOE-202ENST00000425718 MYH10P35580 1976 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 RFXAPO00287 272 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 TBC1D4O60343 1298 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 SYCP1Q15431 976 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 TPGS2Q68CL5 300 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 PRSS55Q6UWB4 352 aaPredicted RBP25.73■■□□□ 1.71
APOE-202ENST00000425718 GAS2L3Q86XJ1 694 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 FMNL3Q8IVF7 1028 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 KBTBD7Q8WVZ9 684 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 B3GALT6Q96L58 329 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 UBE2TQ9NPD8 197 aaPredicted RBP25.73■■□□□ 1.71
APOE-202ENST00000425718 IFNKQ9P0W0 207 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 STXBP5LQ9Y2K9 1186 aa25.73■■□□□ 1.71
APOE-202ENST00000425718 A8MXQ7 604 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 SRGAP2BP0DMP2 458 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 KLRC2P26717 231 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 KCNMA1Q12791 1236 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 NFE2Q16621 373 aaPredicted RBP25.72■■□□□ 1.71
APOE-202ENST00000425718 KLHDC7AQ5VTJ3 777 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 C2orf15Q8WU43 125 aaKnown RBP25.72■■□□□ 1.71
APOE-202ENST00000425718 KLHL5Q96PQ7 755 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 MRPL45Q9BRJ2 306 aaKnown RBP25.72■■□□□ 1.71
APOE-202ENST00000425718 NUP58Q9BVL2 599 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 NT5C1AQ9BXI3 368 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 TLE6Q9H808 572 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.72■■□□□ 1.717e-11■■■■■ 48.1
APOE-202ENST00000425718 CISHQ9NSE2 258 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 SIK3Q9Y2K2 1263 aa25.72■■□□□ 1.71
APOE-202ENST00000425718 CNPP09543 421 aaKnown RBP25.71■■□□□ 1.71
APOE-202ENST00000425718 WEE2P0C1S8 567 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 CPB1P15086 417 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 IRS1P35568 1242 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 PLCB2Q00722 1185 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 RAB33AQ14088 237 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 PHLDB3Q6NSJ2 640 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 RTL10Q7L3V2 364 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 AUTS2Q8WXX7 1259 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 FAM161BQ96MY7 647 aa25.71■■□□□ 1.71
APOE-202ENST00000425718 NAP1L5Q96NT1 182 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms