RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ATF7P17544 494 aaPredicted RBP16.17■□□□□ 0.18
ACTB-204ENST00000425660 LRPAP1P30533 357 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PLEKHA7Q6IQ23 1121 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 MRPL10Q7Z7H8 261 aaKnown RBP16.17■□□□□ 0.18
ACTB-204ENST00000425660 HACE1Q8IYU2 909 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 WDTC1Q8N5D0 677 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 NOA1Q8NC60 698 aaKnown RBP16.17■□□□□ 0.18
ACTB-204ENST00000425660 GSTCDQ8NEC7 633 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 SPATA4Q8NEY3 305 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 CAGE1Q8TC20 777 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
ACTB-204ENST00000425660 SEZ6LQ9BYH1 1024 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.17■□□□□ 0.183e-14■■■□□ 15
ACTB-204ENST00000425660 GDAP2Q9NXN4 497 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 ADAM22Q9P0K1 906 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
ACTB-204ENST00000425660 KIAA1257Q9ULG3 409 aa16.17■□□□□ 0.18
ACTB-204ENST00000425660 TRIP11Q15643 1979 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 FRMPD3Q5JV73 1810 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 A0A0U1RQG5 324 aaPredicted RBP16.16■□□□□ 0.18
ACTB-204ENST00000425660 MIF4GDA9UHW6 222 aaKnown RBP16.16■□□□□ 0.18
ACTB-204ENST00000425660 KCNK3O14649 394 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 CD52P31358 61 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 PAFAH1B1P43034 410 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 RAB27AP51159 221 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 SOX4Q06945 474 aaPredicted RBP16.16■□□□□ 0.18
ACTB-204ENST00000425660 PAK2Q13177 524 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 DSC3Q14574 896 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 LIMS2Q7Z4I7 341 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 ACTRT1Q8TDG2 376 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 ZNF560Q96MR9 790 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 STARD7Q9NQZ5 370 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 CEP83Q9Y592 693 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.16■□□□□ 0.18
ACTB-204ENST00000425660 SNX9Q9Y5X1 595 aa16.16■□□□□ 0.18
ACTB-204ENST00000425660 DDX3YO15523 660 aaKnown RBP16.15■□□□□ 0.18
ACTB-204ENST00000425660 GHRP10912 638 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 VDRP11473 427 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 CKBP12277 381 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 H2AFXP16104 143 aaPredicted RBP16.15■□□□□ 0.18
ACTB-204ENST00000425660 NDST1P52848 882 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 ZNF618Q5T7W0 954 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 CCDC181Q5TID7 509 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 LIN9Q5TKA1 542 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 TRAF7Q6Q0C0 670 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 RASGEF1CQ8N431 466 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 MSANTD4Q8NCY6 345 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 CD101Q93033 1021 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 C11orf70Q9BRQ4 267 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 NT5C1AQ9BXI3 368 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 CARD9Q9H257 536 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 ANKZF1Q9H8Y5 726 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 MRPL47Q9HD33 250 aaKnown RBP16.15■□□□□ 0.18
ACTB-204ENST00000425660 PAK6Q9NQU5 681 aaPredicted RBP16.15■□□□□ 0.18
ACTB-204ENST00000425660 GIT1Q9Y2X7 761 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 A0A0U1RQF3 1178 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 TCRBV5S1A1TA0A578 114 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 MEIS3P2A8K0S8 358 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 ARVCFO00192 962 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 CALB1P05937 261 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 ITGA4P13612 1032 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 MAMLD1Q13495 774 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 CNGA2Q16280 664 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 MMS22LQ6ZRQ5 1243 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
ACTB-204ENST00000425660 MS4A14Q96JA4 679 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 ZFP42Q96MM3 310 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 SLC38A7Q9NVC3 462 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 TTC7AQ9ULT0 858 aaPredicted RBP16.15■□□□□ 0.18
ACTB-204ENST00000425660 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.15■□□□□ 0.183e-8■□□□□ 8.2
ACTB-204ENST00000425660 SCINQ9Y6U3 715 aa16.15■□□□□ 0.18
ACTB-204ENST00000425660 SCN1AP35498 2009 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 KPNA7A9QM74 516 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 O00370 1275 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 DNM1LO00429 736 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 MGEA5O60502 916 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 CD19P15391 556 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 COMTP21964 271 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 SSTR3P32745 418 aaPredicted RBP16.14■□□□□ 0.17
ACTB-204ENST00000425660 DNA2P51530 1060 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 MESDQ14696 234 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 SOWAHAQ2M3V2 549 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 C2CD6Q53TS8 623 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 AGMOQ6ZNB7 445 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 UNC93AQ86WB7 457 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 MMGT1Q8N4V1 131 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 SH3TC2Q8TF17 1288 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 SELENOOQ9BVL4 669 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 TRPV6Q9H1D0 765 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 RNF19AQ9NV58 838 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 PARVAQ9NVD7 372 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 EHD2Q9NZN4 543 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 TMEM59LQ9UK28 342 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 PTPN22Q9Y2R2 807 aa16.14■□□□□ 0.17
ACTB-204ENST00000425660 KBTBD13C9JR72 458 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 SPTLC1O15269 473 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 MLH1P40692 756 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 TAF6P49848 677 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 CDK7P50613 346 aa16.13■□□□□ 0.17
ACTB-204ENST00000425660 GSCP56915 257 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms