RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RBM12Q9NTZ6 932 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 UXTQ9UBK9 157 aaPredicted RBP13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ANGPTL2Q9UKU9 493 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DOCK8Q8NF50 2099 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 EP300Q09472 2414 aaPredicted RBP13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
HLA-DQB3-203ENST00000425319 VWA3AA6NCI4 1184 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 K7ENM7 598 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ABLIM1O14639 778 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TRAK2O60296 914 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TBCAO75347 108 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 AKAP3O75969 853 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ZNF806P0C7X5 589 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CSH1P0DML2 217 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CSH2P0DML3 217 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 DRD1P21728 446 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PNPLA4P41247 253 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 AARSP49588 968 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TAF6P49848 677 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 NCKAP1LP55160 1127 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 RPL10AP62906 217 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TSPY1Q01534 308 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MAPK7Q13164 816 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 RUNX3Q13761 415 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 NBR1Q14596 966 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ELF2Q15723 593 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SLC39A12Q504Y0 691 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 HYIQ5T013 277 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 FAM160A2Q8N612 972 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CACTINQ8WUQ7 758 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PLIN2Q99541 437 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ARRDC1-AS1Q9H2J1 176 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PARVGQ9HBI0 331 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PPP4R2Q9NY27 417 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TBX20Q9UMR3 447 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PCDHB5Q9Y5E4 795 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PCDHGA5Q9Y5G8 931 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SHISA7A6NL88 538 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PP2D1A8MPX8 630 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ARNTLO00327 626 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CYB561D2O14569 222 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 BMP15O95972 392 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CYP11A1P05108 521 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SOX9P48436 509 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 LIMK1P53667 647 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 POU5F1Q01860 360 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 DHX8Q14562 1220 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 KARSQ15046 597 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SV2CQ496J9 727 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MIA3Q5JRA6 1907 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 C9orf57Q5W0N0 161 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ADALQ6DHV7 355 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 JADE1Q6IE81 842 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GVINP1Q7Z2Y8 2422 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 C11orf74Q86VG3 221 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CMTM8Q8IZV2 173 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 FSIP1Q8NA03 581 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PYM1Q9BRP8 204 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 LRRC3Q9BY71 257 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 VPS45Q9NRW7 570 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TDP1Q9NUW8 608 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 EXOC7Q9UPT5 735 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MYH15Q9Y2K3 1946 aa13.26□□□□□ -0.29
HLA-DQB3-203ENST00000425319 K7ESF4 209 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PDE6CP51160 858 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SLC12A3P55017 1021 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ATP2C1P98194 919 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 POTEHQ6S545 545 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GAREM2Q75VX8 874 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GPBP1Q86WP2 473 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 NT5DC4Q86YG4 428 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CPA6Q8N4T0 437 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GIPC2Q8TF65 315 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ACDQ96AP0 544 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ZFYVE19Q96K21 471 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ZNF560Q96MR9 790 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 DPP3Q9NY33 737 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 C2CD2Q9Y426 696 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CACNA1IQ9P0X4 2223 aa13.25□□□□□ -0.29
HLA-DQB3-203ENST00000425319 A0A0B4J269 797 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TRDMT1O14717 391 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 HUS1O60921 280 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PRPF40AO75400 957 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 KRT37O76014 449 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 IL18RAPO95256 599 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 LDHAP00338 332 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms