RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	PAK2	Q13177	524 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	NCOA4	Q13772	614 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	DUSP28	Q4G0W2	176 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	FAM47C	Q5HY64	1035 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	ATF7IP2	Q5U623	682 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	PALB2	Q86YC2	1186 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	RHPN2	Q8IUC4	686 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	AEN	Q8WTP8	325 aa	Known RBP	10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	CAVIN3	Q969G5	261 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	ARHGEF26	Q96DR7	871 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	RUNDC3B	Q96NL0	473 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	OSGEP	Q9NPF4	335 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	PDGFC	Q9NRA1	345 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	ALG6	Q9Y672	507 aa		10.7	□□□□□ -0.7
POLR1A-204	ENST00000424089	COL4A4	P53420	1690 aa	Predicted RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	RRN3P2	A6NIE6	340 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	KRIT1	O00522	736 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	ABLIM1	O14639	778 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	DDX3Y	O15523	660 aa	Known RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	BAIAP3	O94812	1187 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	ASS1	P00966	412 aa	Known RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	TNNC2	P02585	160 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	CYP1A1	P04798	512 aa	Predicted RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	MCF2	P10911	925 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	CYP2C9	P11712	490 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	INSRR	P14616	1297 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	CTNNA2	P26232	953 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	SSTR3	P32745	418 aa	Predicted RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	NOP14	P78316	857 aa	Known RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	CENPC	Q03188	943 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	TAP1	Q03518	808 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	MBTD1	Q05BQ5	628 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	DRP2	Q13474	957 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	BFSP2	Q13515	415 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	CUL1	Q13616	776 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	LIN9	Q5TKA1	542 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	TAF3	Q5VWG9	929 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	ALS2CL	Q60I27	953 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	HERC6	Q8IVU3	1022 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	EFCAB13	Q8IY85	973 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	LRRC71	Q8N4P6	559 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	LINC01465	Q8N7H1	131 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	WHAMM	Q8TF30	809 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	COPS5	Q92905	334 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	ZNF653	Q96CK0	615 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	ARID3A	Q99856	593 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	ZNF518B	Q9C0D4	1074 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	RNPEP	Q9H4A4	650 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	MRPL47	Q9HD33	250 aa	Known RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	TRMT13	Q9NUP7	481 aa	Known RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	LMCD1	Q9NZU5	365 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	DMGDH	Q9UI17	866 aa	Known RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	NOD1	Q9Y239	953 aa		10.69	□□□□□ -0.7
POLR1A-204	ENST00000424089	EPOP	A6NHQ4	379 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	INO80B-WBP1	J3KQ70	363 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	PITPNM1	O00562	1244 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	LSM8	O95777	96 aa	Known RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	MYL3	P08590	195 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	TNNT3	P45378	269 aa	Predicted RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	NSF	P46459	744 aa	Known RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	TRPC3	Q13507	836 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	DGKD	Q16760	1214 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	ZNF410	Q86VK4	478 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	TRIM50	Q86XT4	487 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	NT5DC4	Q86YG4	428 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	PHF13	Q86YI8	300 aa	Predicted RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	CD302	Q8IX05	232 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	MCOLN2	Q8IZK6	566 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	MREG	Q8N565	214 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	TTC39C	Q8N584	583 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	GOLGA6L1	Q8N7Z2	621 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	UBR7	Q8N806	425 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	FAM71B	Q8TC56	605 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	MAIP1	Q8WWC4	291 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	ANKRD36BP1	Q96IX9	119 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	KRT12	Q99456	494 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	ZSWIM1	Q9BR11	485 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	MTG1	Q9BT17	334 aa	Predicted RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	ZBED2	Q9BTP6	218 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	PI4K2A	Q9BTU6	479 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	NUP85	Q9BW27	656 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	INO80B	Q9C086	356 aa	Predicted RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	ASB7	Q9H672	318 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	RPF1	Q9H9Y2	349 aa	Known RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	CD320	Q9NPF0	282 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	CNOT8	Q9UFF9	292 aa	Known RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	NOC2L	Q9Y3T9	749 aa	Known RBP	10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	PCDHB4	Q9Y5E5	795 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	SCIN	Q9Y6U3	715 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	SI	P14410	1827 aa		10.68	□□□□□ -0.7
POLR1A-204	ENST00000424089	MYH9	P35579	1960 aa	Known RBP	10.67	□□□□□ -0.7
POLR1A-204	ENST00000424089	TRIP12	Q14669	1992 aa	Predicted RBP	10.67	□□□□□ -0.7
POLR1A-204	ENST00000424089	SCN10A	Q9Y5Y9	1956 aa		10.67	□□□□□ -0.7
POLR1A-204	ENST00000424089	FAM187A	A6NFU0	413 aa		10.67	□□□□□ -0.7
POLR1A-204	ENST00000424089	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms