RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZNF280DQ6N043 979 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 ANKS3Q6ZW76 656 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 METTL23Q86XA0 190 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 LNX1Q8TBB1 728 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-202ENST00000422991 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-202ENST00000422991 MRPL45Q9BRJ2 306 aaKnown RBP18.2■□□□□ 0.5
COL7A1-202ENST00000422991 SDCBP2Q9H190 292 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 MTRRQ9UBK8 725 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 SSX2IPQ9Y2D8 614 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.19■□□□□ 0.5
COL7A1-202ENST00000422991 C2orf71A6NGG8 1288 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 HIDE1A8MVS5 230 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 GABRDO14764 452 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 TBC1D4O60343 1298 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 CXCL14O95715 111 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 FAM163BP0C2L3 166 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 WARSP23381 471 aaKnown RBP18.19■□□□□ 0.5
COL7A1-202ENST00000422991 RAP1GAPP47736 663 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 ADGRE1Q14246 886 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 DPY19L2P1Q6NXN4 242 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 OSTM1Q86WC4 334 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 ARHGEF19Q8IW93 802 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 MRPL43Q8N983 215 aaKnown RBP18.19■□□□□ 0.5
COL7A1-202ENST00000422991 ERGIC2Q96RQ1 377 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 ARID3AQ99856 593 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 RTP3Q9BQQ7 232 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 CYP3A43Q9HB55 503 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 RXFP1Q9HBX9 757 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.19■□□□□ 0.5
COL7A1-202ENST00000422991 LMCD1Q9NZU5 365 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 SIK3Q9Y2K2 1263 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 BACE2Q9Y5Z0 518 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 REV3LO60673 3130 aa18.19■□□□□ 0.5
COL7A1-202ENST00000422991 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 H7C4K7 107 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 TEX33O43247 280 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 POU3F3P20264 500 aaPredicted RBP18.18■□□□□ 0.5
COL7A1-202ENST00000422991 IGFBP4P22692 258 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 TBXAS1P24557 533 aaPredicted RBP18.18■□□□□ 0.5
COL7A1-202ENST00000422991 CDH8P55286 799 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 APBA1Q02410 837 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 GCNT1Q02742 428 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 CREMQ03060 361 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 CUL2Q13617 745 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 SYCP1Q15431 976 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 CTXN3Q4LDR2 81 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 PHLDB3Q6NSJ2 640 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 PPM1KQ8N3J5 372 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 MICAL1Q8TDZ2 1067 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 LSM14BQ9BX40 385 aaKnown RBP18.18■□□□□ 0.5
COL7A1-202ENST00000422991 FNIP2Q9P278 1114 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 APEX2Q9UBZ4 518 aa18.18■□□□□ 0.5
COL7A1-202ENST00000422991 PRRC2BQ5JSZ5 2229 aaKnown RBP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 CNPP09543 421 aaKnown RBP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 WEE2P0C1S8 567 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 RPL17P18621 184 aaKnown RBP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 CA8P35219 290 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 LHX1P48742 406 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 UBASH3AP57075 661 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 NR1I3Q14994 352 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 RSPO2Q6UXX9 243 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 UBR7Q8N806 425 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 OR10T2Q8NGX3 314 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 KAT5Q92993 513 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 OXCT2Q9BYC2 517 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 FAM124BQ9H5Z6 455 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 PLCB1Q9NQ66 1216 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 DDX43Q9NXZ2 648 aaKnown RBP18.17■□□□□ 0.5
COL7A1-202ENST00000422991 IFNKQ9P0W0 207 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 FBXL5Q9UKA1 691 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 NME7Q9Y5B8 376 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 MTCH2Q9Y6C9 303 aa18.17■□□□□ 0.5
COL7A1-202ENST00000422991 OR6C75A6NL08 312 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 TEX28O15482 410 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 ADAM12O43184 909 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 HCRTO43612 131 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 NDUFV1P49821 464 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 KLK7P49862 253 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 SLC8B1Q6J4K2 584 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 GJB7Q6PEY0 223 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 SARM1Q6SZW1 724 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 RRAGAQ7L523 313 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 ADGRD2Q7Z7M1 963 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 THEM5Q8N1Q8 247 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 KREMEN1Q96MU8 473 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 CLSTN3Q9BQT9 956 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 EMILIN2Q9BXX0 1053 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 GANQ9H2C0 597 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 SNX25Q9H3E2 840 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 CDY1Q9Y6F8 540 aa18.16■□□□□ 0.5
COL7A1-202ENST00000422991 A0A1W2PQC6 194 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 CD58P19256 250 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 PCSK1P29120 753 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 GNL1P36915 607 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-202ENST00000422991 YWHAEP62258 255 aaKnown RBP18.15■□□□□ 0.5
COL7A1-202ENST00000422991 KLHDC7AQ5VTJ3 777 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 TTC39CQ8N584 583 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms