RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 HMGCS2P54868 508 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 NBPF12Q5TAG4 269 aaPredicted RBP16.7■□□□□ 0.26
CDH1-202ENST00000422392 CYP4A22Q5TCH4 519 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 TRABD2AQ86V40 505 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 BBOF1Q8ND07 529 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
CDH1-202ENST00000422392 POTEJP0CG39 1038 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 DYNLT1P63172 113 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 PLCB3Q01970 1234 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 MYO1EQ12965 1108 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 ZNF268Q14587 947 aaPredicted RBP16.69■□□□□ 0.26
CDH1-202ENST00000422392 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 WDR72Q3MJ13 1102 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 SAMD7Q7Z3H4 446 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 ANKMY2Q8IV38 441 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
CDH1-202ENST00000422392 CNTNAP2Q9UHC6 1331 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 MGAMO43451 1857 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 TMEM191CA6NGB0 347 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 KRT15P19012 456 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 KCNA3P22001 575 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 MMP8P22894 467 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 ELF1P32519 619 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
CDH1-202ENST00000422392 SMTNL2Q2TAL5 461 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 SUPT20HL1Q3ZLR7 823 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 XKR3Q5GH77 459 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 TRIM72Q6ZMU5 477 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 ZBTB33Q86T24 672 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 REPS2Q8NFH8 660 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 VCPIP1Q96JH7 1222 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 IP6K2Q9UHH9 426 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 STYXL1Q9Y6J8 313 aa16.69■□□□□ 0.26
CDH1-202ENST00000422392 A0A1W2PPM1 405 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 LRRD1A4D1F6 860 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 MAFGO15525 162 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 ASMTLO95671 621 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 RPA3P35244 121 aaPredicted RBP16.68■□□□□ 0.26
CDH1-202ENST00000422392 IL9RQ01113 521 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 DCUN1D2Q6PH85 259 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 PPP1R21Q6ZMI0 780 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 SPOCD1Q6ZMY3 1216 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 RELL1Q8IUW5 271 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 ALLCQ8N6M5 410 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 CFAP57Q96MR6 1250 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 CGRRF1Q99675 332 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 TRABDQ9H4I3 376 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 LCTP09848 1927 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 DKC1O60832 514 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDH1-202ENST00000422392 BACE1P56817 501 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 RCOR2Q8IZ40 523 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 PORCNQ9H237 461 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
CDH1-202ENST00000422392 A0A0B4J269 797 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 SGK1O00141 431 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 TJP3O95049 919 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 WEE2P0C1S8 567 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 RIPK1Q13546 671 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 EFTUD2Q15029 972 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDH1-202ENST00000422392 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
CDH1-202ENST00000422392 KCNT1Q5JUK3 1230 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 GBP7Q8N8V2 638 aaPredicted RBP16.67■□□□□ 0.26
CDH1-202ENST00000422392 MYLK2Q9H1R3 596 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 ZNF302Q9NR11 478 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 ARHGEF3Q9NR81 526 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 TJP2Q9UDY2 1190 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 ECM2O94769 699 aaPredicted RBP16.67■□□□□ 0.26
CDH1-202ENST00000422392 ANP32DO95626 131 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 MYL6P60660 151 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 MKRN3Q13064 507 aaKnown RBP16.67■□□□□ 0.26
CDH1-202ENST00000422392 PDIA2Q13087 525 aaKnown RBP16.67■□□□□ 0.26
CDH1-202ENST00000422392 SLC1A5Q15758 541 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 XRRA1Q6P2D8 792 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 DNAJC24Q6P3W2 148 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 ASRGL1Q7L266 308 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 TMEM130Q8N3G9 435 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 RBM41Q96IZ5 413 aaKnown RBP16.67■□□□□ 0.26
CDH1-202ENST00000422392 TMEM237Q96Q45 408 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 PHTF1Q9UMS5 762 aa16.67■□□□□ 0.26
CDH1-202ENST00000422392 SIP14410 1827 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 hCG_1818297A0A087WSY0 165 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 H0YCG3 227 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 ITGBL1O95965 494 aaPredicted RBP16.66■□□□□ 0.26
CDH1-202ENST00000422392 OATP04181 439 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 ABHD2P08910 425 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 FGFR1P11362 822 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 CA4P22748 312 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 TBXAS1P24557 533 aaPredicted RBP16.66■□□□□ 0.26
CDH1-202ENST00000422392 CETN2P41208 172 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 MSH2P43246 934 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 GDF10P55107 478 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 CIAPIN1Q6FI81 312 aa16.66■□□□□ 0.26
CDH1-202ENST00000422392 GPAT2Q6NUI2 795 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms