RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ALDH1A3P47895 512 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 CLCN5P51795 746 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 NDUFA8P51970 172 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 NUBP1P53384 320 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 EPHB3P54753 998 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 EPHA5P54756 1037 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 SMARCB1Q12824 385 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 BFSP1Q12934 665 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 SNRNP35Q16560 246 aaKnown RBP17.74■□□□□ 0.43
LINC00404-201ENST00000418660 KNOP1Q1ED39 458 aaKnown RBP17.74■□□□□ 0.43
LINC00404-201ENST00000418660 DUOXA2Q1HG44 320 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 ASTLQ6HA08 431 aaPredicted RBP17.74■□□□□ 0.43
LINC00404-201ENST00000418660 C12orf56Q8IXR9 622 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 HS6ST3Q8IZP7 471 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 SIX5Q8N196 739 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 XXYLT1Q8NBI6 393 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 OR5B17Q8NGF7 314 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 TCEAL4Q96EI5 215 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 FAM84AQ96KN4 292 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 ASAH2Q9NR71 780 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 EXOC1Q9NV70 894 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 GDAP2Q9NXN4 497 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 SIX4Q9UIU6 781 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 SLC27A5Q9Y2P5 690 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 TSC2P49815 1807 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 SCN1AP35498 2009 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 DOCK6Q96HP0 2047 aa17.74■□□□□ 0.43
LINC00404-201ENST00000418660 PTPRJQ12913 1337 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 ZNF318Q5VUA4 2279 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 HUS1O60921 280 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 TNNC2P02585 160 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 NPR3P17342 541 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 CCR2P41597 374 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 TUFMP49411 452 aaKnown RBP17.73■□□□□ 0.43
LINC00404-201ENST00000418660 CYP2J2P51589 502 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 STK4Q13043 487 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 KMT5BQ4FZB7 885 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 SLC39A12Q504Y0 691 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 LMBRD2Q68DH5 695 aaPredicted RBP17.73■□□□□ 0.43
LINC00404-201ENST00000418660 SCARA3Q6AZY7 606 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 WDR49Q8IV35 697 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 RDH13Q8NBN7 331 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 PRSS33Q8NF86 280 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 FLCNQ8NFG4 579 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 GPR152Q8TDT2 470 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 C2orf15Q8WU43 125 aaKnown RBP17.73■□□□□ 0.43
LINC00404-201ENST00000418660 L1RE1Q9UN81 338 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 R3HCC1Q9Y3T6 440 aaKnown RBP17.73■□□□□ 0.43
LINC00404-201ENST00000418660 ASB3Q9Y575 518 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 KMT2EQ8IZD2 1858 aa17.73■□□□□ 0.43
LINC00404-201ENST00000418660 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 ECI2O75521 394 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 MYL4P12829 197 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 GPC5P78333 572 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 MYO1EQ12965 1108 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 PSMD6Q15008 389 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 CWF19L1Q69YN2 538 aaKnown RBP17.72■□□□□ 0.43
LINC00404-201ENST00000418660 POTEHQ6S545 545 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 LRRTM3Q86VH5 581 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
LINC00404-201ENST00000418660 TMEM86AQ8N2M4 240 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 TMEM105Q8N8V8 129 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 FSIP1Q8NA03 581 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 KIAA0895Q8NCT3 520 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 GOLGA5Q8TBA6 731 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 SPATA18Q8TC71 538 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 KXD1Q9BQD3 176 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 LRRC3Q9BY71 257 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 DNAJC25Q9H1X3 360 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 CA14Q9ULX7 337 aa17.72■□□□□ 0.43
LINC00404-201ENST00000418660 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.43
LINC00404-201ENST00000418660 MOSPD3O75425 235 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 PTPN5P54829 565 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 NUCB2P80303 420 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 CYP24A1Q07973 514 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 DPH6Q7L8W6 267 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 TMC8Q8IU68 726 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 TTC9BQ8N6N2 239 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 TOP6BLQ8N6T0 577 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 SPPL2BQ8TCT7 592 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 ELSPBP1Q96BH3 223 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 HPDLQ96IR7 371 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 FNBP1Q96RU3 617 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 DDX43Q9NXZ2 648 aaKnown RBP17.71■□□□□ 0.43
LINC00404-201ENST00000418660 SNX9Q9Y5X1 595 aa17.71■□□□□ 0.43
LINC00404-201ENST00000418660 EXOC3O60645 756 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 SOAT2O75908 522 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 RPN1P04843 607 aaKnown RBP17.7■□□□□ 0.42
LINC00404-201ENST00000418660 DLATP10515 647 aaKnown RBP17.7■□□□□ 0.42
LINC00404-201ENST00000418660 TNNI1P19237 187 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 AOC1P19801 751 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 MYL7Q01449 175 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 TSPY1Q01534 308 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 NHLH1Q02575 133 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 FAM78AQ5JUQ0 283 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 TANGO2Q6ICL3 276 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 KRBA2Q6ZNG9 492 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 TRAPPC11Q7Z392 1133 aa17.7■□□□□ 0.42
LINC00404-201ENST00000418660 DNAJB7Q7Z6W7 309 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms