RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NPTXRO95502 500 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 GNAT1P11488 350 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 CD58P19256 250 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 POLR2BP30876 1174 aaKnown RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 TNNT3P45378 269 aaPredicted RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 GABRB2P47870 512 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 MRPS25P82663 173 aaKnown RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 LACTBP83111 547 aaPredicted RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 STILQ15468 1287 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 WDR72Q3MJ13 1102 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 ALS2CLQ60I27 953 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 DUPD1Q68J44 220 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 WDTC1Q8N5D0 677 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 LRRC52Q8N7C0 313 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 C1orf131Q8NDD1 294 aaKnown RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 TRPV1Q8NER1 839 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 FNIP1Q8TF40 1166 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 HPDLQ96IR7 371 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 ELOVL4Q9GZR5 314 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM49AQ9H0Q0 323 aaPredicted RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 RAB17Q9H0T7 212 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 LRRC19Q9H756 370 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 SMYD3Q9H7B4 428 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 CDHR5Q9HBB8 845 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 ST7Q9NRC1 585 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 DPP3Q9NY33 737 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 IP6K2Q9UHH9 426 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 AMACRQ9UHK6 382 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 KIAA1257Q9ULG3 409 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 BARX2Q9UMQ3 279 aaPredicted RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 NFU1Q9UMS0 254 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 CEP83Q9Y592 693 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 TDRD15B5MCY1 1934 aaKnown RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 ESYT3A0FGR9 886 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 C17orf102A2RUQ5 167 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 O00370 1275 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 TTI1O43156 1089 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 TREHO43280 583 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 SYF2O95926 243 aaKnown RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 HMGCRP04035 888 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 RPLP2P05387 115 aaKnown RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 MYL3P08590 195 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 KRT19P08727 400 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 VDRP11473 427 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 FGFR4P22455 802 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 GBP1P32455 592 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 PTPN7P35236 360 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 RAP1GAPP47736 663 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 CRYBB1P53674 252 aaPredicted RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 IRX5P78411 483 aaPredicted RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 ZNF252P-AS1Q0IIN9 211 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 KLF1Q13351 362 aaPredicted RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 CNGA2Q16280 664 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 PTPN20Q4JDL3 420 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 SPDYCQ5MJ68 293 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 UBXN11Q5T124 520 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 AADACL2Q6P093 401 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 LLGL2Q6P1M3 1020 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 TAF2Q6P1X5 1199 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 DENND1BQ6P3S1 775 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 DNAJC24Q6P3W2 148 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 LIMS2Q7Z4I7 341 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 RPAINQ86UA6 219 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 JAMLQ86YT9 394 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 RHOT1Q8IXI2 618 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 EXD1Q8NHP7 514 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 DNAJB3Q8WWF6 145 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 KIF12Q96FN5 646 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 TMEM176AQ96HP8 235 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 TWNKQ96RR1 684 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 OSMRQ99650 979 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 ERP44Q9BS26 406 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 EIF2AQ9BY44 585 aaKnown RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 WDR35Q9P2L0 1181 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 RASAL2Q9UJF2 1139 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 AGAP1Q9UPQ3 857 aa9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM170AA1A519 330 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 SIGLEC16A6NMB1 481 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 PODXLO00592 558 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TLR3O15455 904 aaKnown RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 RECQL4O94761 1208 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 ALDH1A1P00352 501 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM153BP0C7A2 387 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 SETSIPP0DME0 302 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 RARAP10276 462 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 KCNE1P15382 129 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 CYP3A5P20815 502 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 COILP38432 576 aaPredicted RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 YARSP54577 528 aaKnown RBP9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 FCGRTP55899 365 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 TAS2R40P59535 323 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 BEX3Q00994 111 aa9.59□□□□□ -0.87
LINCMD1-201ENST00000418518 DR1Q01658 176 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms