RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 SYT10Q6XYQ8 523 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 WHAMMQ8TF30 809 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 C18orf25Q96B23 403 aaPredicted RBP10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 MMS19Q96T76 1030 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 GAD1Q99259 594 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 NAPGQ99747 312 aaPredicted RBP10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 ARID3AQ99856 593 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 TMEM175Q9BSA9 504 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 UBXN6Q9BZV1 441 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 PDCL3Q9H2J4 239 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 TMEM51Q9NW97 253 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 STK39Q9UEW8 545 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 TUBGCP4Q9UGJ1 667 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 PCDHB7Q9Y5E2 793 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 SNX9Q9Y5X1 595 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 SCINQ9Y6U3 715 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 ANK1P16157 1881 aa10.76□□□□□ -0.69
HMGA1P6-201ENST00000418454 RCCD1A6NED2 376 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 M0QZQ0 153 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 TULP1O00294 542 aaPredicted RBP10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 THAP12O43422 761 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 PQBP1O60828 265 aaKnown RBP10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 TIMP1P01033 207 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 PNMA6AP0CW24 399 aaPredicted RBP10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 TCP1P17987 556 aaKnown RBP10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 TYMPP19971 482 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 MMP8P22894 467 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 GNL1P36915 607 aaPredicted RBP10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 MLH1P40692 756 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 SLC1A1P43005 524 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 NOMO3P69849 1222 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 DSC1Q08554 894 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 SGO2Q562F6 1265 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 NOMO2Q5JPE7 1267 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 ZDHHC17Q8IUH5 632 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 NPAS4Q8IUM7 802 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 MCOLN2Q8IZK6 566 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 SLC4A11Q8NBS3 891 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 DBF4BQ8NFT6 615 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 SLC20A1Q8WUM9 679 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 RPGRIP1Q96KN7 1286 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 PCDHB18PQ96TA0 734 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 NCAPGQ9BPX3 1015 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 APOL6Q9BWW8 343 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 SNX25Q9H3E2 840 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 TMEM39AQ9NV64 488 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 KLK14Q9P0G3 267 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 STXBP5LQ9Y2K9 1186 aa10.75□□□□□ -0.69
HMGA1P6-201ENST00000418454 PODXLO00592 558 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 BAIAP3O94812 1187 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 SCNN1AP37088 669 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 GABRB2P47870 512 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 RPL34P49207 117 aaKnown RBP10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 NDST1P52848 882 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 SOX4Q06945 474 aaPredicted RBP10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 ZNF268Q14587 947 aaPredicted RBP10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 ACAP1Q15027 740 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 MAPRE1Q15691 268 aaKnown RBP10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 TRIM60Q495X7 471 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 C11orf63Q6NUN7 778 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 ARCQ7LC44 396 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 UBE2Q1Q7Z7E8 422 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 METTL23Q86XA0 190 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 TMEM199Q8N511 208 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 TPCN2Q8NHX9 752 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 SLC35G2Q8TBE7 412 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 HEXIM2Q96MH2 286 aaKnown RBP10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 ZFP42Q96MM3 310 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 ACBD6Q9BR61 282 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 ABCB6Q9NP58 842 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 PARVAQ9NVD7 372 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 MIOSQ9NXC5 875 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 CDC23Q9UJX2 597 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 POLIQ9UNA4 740 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 SAR1BQ9Y6B6 198 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 CITO14578 2027 aa10.74□□□□□ -0.69
HMGA1P6-201ENST00000418454 A8MXQ7 604 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 MIF4GDA9UHW6 222 aaKnown RBP10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 O00370 1275 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 CYB561D2O14569 222 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 CLSTN1O94985 981 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 ALDH2P05091 517 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 ODC1P11926 461 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 CD58P19256 250 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 PCSK1P29120 753 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 MAN1A1P33908 653 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 ACADSBP45954 432 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 SCNN1GP51170 649 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 CDH8P55286 799 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 SLC8A3P57103 927 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 ITIH3Q06033 890 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 SMARCB1Q12824 385 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 WHAMMP3Q1A5X7 153 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 GLRA4Q5JXX5 417 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 MEI1Q5TIA1 1274 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 PLEKHA7Q6IQ23 1121 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 MFSD5Q6N075 450 aa10.73□□□□□ -0.69
HMGA1P6-201ENST00000418454 MON1BQ7L1V2 547 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms