RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 AHRRA9YTQ3 701 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 B5MCH6 92 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 LEFTY2O00292 366 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 IGSF3O75054 1194 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 PPFIA4O75335 1185 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 GNAI2P04899 355 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 LAG3P18627 525 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 KRT4P19013 534 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 HSD3B2P26439 372 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 HSPA1LP34931 641 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 FAM189BP81408 668 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 TMPRSS15P98073 1019 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 NHLH2Q02577 135 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 METTL24Q5JXM2 366 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 SDE2Q6IQ49 451 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 LRRC55Q6ZSA7 311 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 CMIPQ8IY22 773 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 FBXO18Q8NFZ0 1043 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZG16BQ96DA0 208 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 PAWRQ96IZ0 340 aaKnown RBP4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 SLC46A2Q9BY10 475 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 MAP3K2Q9Y2U5 619 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 AFF2P51816 1311 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 RPTORQ8N122 1335 aa4.61□□□□□ -1.67
HMGB3P20-201ENST00000417997 TAF1LQ8IZX4 1826 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 TUBGCP6Q96RT7 1819 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 PI4KAP2A4QPH2 592 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 RNASET2O00584 256 aaKnown RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 FOXN1O15353 648 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 ADCY6O43306 1168 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 BRINP1O60477 761 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 ALDH1L1O75891 902 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 NCR1O76036 304 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 CLSTN1O94985 981 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 NDUFA10O95299 355 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 GASTP01350 101 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 STAT4Q14765 748 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 PROSER3Q2NL68 480 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 PRAMEF14Q5SWL7 426 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 MBNL2Q5VZF2 373 aaKnown RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 CEP85Q6P2H3 762 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 KSR2Q6VAB6 950 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 KIF6Q6ZMV9 814 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 GDF7Q7Z4P5 450 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 SKAP1Q86WV1 359 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 RPAP2Q8IXW5 612 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 ANKRD44Q8N8A2 993 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 PI4KAP1Q8N8J0 262 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 REPS2Q8NFH8 660 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 AUTS2Q8WXX7 1259 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 RIN2Q8WYP3 895 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 CEP95Q96GE4 821 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 UHRF1Q96T88 793 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 AGAP2Q99490 1192 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 TEX13AQ9BXU3 409 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 VTA1Q9NP79 307 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 AKIP1Q9NQ31 210 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 ANKFY1Q9P2R3 1169 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZBTB21Q9ULJ3 1066 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 LRRFIP2Q9Y608 721 aaKnown RBP4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 ATRNO75882 1429 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 SPEF2Q9C093 1822 aa4.6□□□□□ -1.67
HMGB3P20-201ENST00000417997 TBKBP1A7MCY6 615 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 LPXNO60711 386 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 PHF2O75151 1096 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 STARD3NLO95772 234 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 C4AP0C0L4 1744 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 C4BP0C0L5 1744 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 CPEP16870 476 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 MGAT1P26572 445 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 ECHS1P30084 290 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 ANP32AP39687 249 aaKnown RBP4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 PIP4K2AP48426 406 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 MASP1P48740 699 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 PER3P56645 1201 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 RAP2BP61225 183 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 TOR2AQ5JU69 321 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 MFSD14BQ5SR56 506 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 ANKRD45Q5TZF3 282 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 BTNL9Q6UXG8 535 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 Q6ZPA2 131 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 COPS6Q7L5N1 327 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 CHD1LQ86WJ1 897 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 SYT12Q8IV01 421 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 DNAJC10Q8IXB1 793 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 SMC5Q8IY18 1101 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 DDX60Q8IY21 1712 aaKnown RBP4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 LILRA3Q8N6C8 439 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 LINS1Q8NG48 757 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 PALLDQ8WX93 1383 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 PIGBQ92521 554 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 MYD88Q99836 296 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 TEX101Q9BY14 249 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 ACE2Q9BYF1 805 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 IFT122Q9HBG6 1241 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 CYP4F11Q9HBI6 524 aa4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 TRPC5Q9UL62 973 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P20-201ENST00000417997 ASAP1Q9ULH1 1129 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms