RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 KRT85P78386 507 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 IL13RA1P78552 427 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 PPP2R5AQ15172 486 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 FAM47AQ5JRC9 791 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 PITRM1Q5JRX3 1037 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 CYB5R4Q7L1T6 521 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 ZNF444Q8N0Y2 327 aaPredicted RBP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 STPG3Q8N7X2 389 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 SLC44A5Q8NCS7 719 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 ESR2Q92731 530 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 ZBTB8AQ96BR9 441 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 TTC14Q96N46 770 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 QRSL1Q9H0R6 528 aaKnown RBP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 ALDH8A1Q9H2A2 487 aaPredicted RBP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 DNAJC18Q9H819 358 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 DNAJC28Q9NX36 388 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 ZIM2Q9NZV7 527 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 HERC5Q9UII4 1024 aaKnown RBP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 CROTQ9UKG9 612 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 EDARQ9UNE0 448 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 LUC7L2Q9Y383 392 aaKnown RBP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 NUMBLQ9Y6R0 609 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 CDK5RAP2Q96SN8 1893 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 FOCADQ5VW36 1801 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 ECM29Q5VYK3 1845 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 MYPNQ86TC9 1320 aa6.77□□□□□ -1.32
NIFKP3-201ENST00000417799 WDR19Q8NEZ3 1342 aa6.77□□□□□ -1.32
NIFKP3-201ENST00000417799 NAV1Q8NEY1 1877 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 DDX60LQ5H9U9 1706 aaKnown RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 KLHL33A6NCF5 533 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 ETV2O00321 342 aaPredicted RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 MAFGO15525 162 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 XPOTO43592 962 aaKnown RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PRC1O43663 620 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHGA12O60330 932 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 LPLP06858 475 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 ANP32AP39687 249 aaKnown RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 ANTXR2P58335 489 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 SRSF2Q01130 221 aaKnown RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 TFAP4Q01664 338 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 NFATC3Q12968 1075 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 SMAD4Q13485 552 aaKnown RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 RTP5Q14D33 572 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 STILQ15468 1287 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 SUPT20HL1Q3ZLR7 823 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 TOR2AQ5JU69 321 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 TATDN1Q6P1N9 297 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 Q6ZUG5 572 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 SYDE1Q6ZW31 735 aaPredicted RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 MIGA2Q7L4E1 593 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 CHST3Q7LGC8 479 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 TMEFF1Q8IYR6 380 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 FBXL16Q8N461 479 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 SNX21Q969T3 373 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 SIGLEC10Q96LC7 697 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 CCDC17Q96LX7 622 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 TCEANC2Q96MN5 208 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 LRRC2Q9BYS8 371 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 NMRK2Q9NPI5 230 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 TMPRSS11EQ9UL52 423 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHGA9Q9Y5G4 932 aaKnown RBP6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHGA8Q9Y5G5 932 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHGA7Q9Y5G6 932 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHGA6Q9Y5G7 932 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHGA3Q9Y5H0 932 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDHGA2Q9Y5H1 932 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 IRAK3Q9Y616 596 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 PMF1-BGLAPU3KQ54 211 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 SCN4AP35499 1836 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 MYH1P12882 1939 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 UTRNP46939 3433 aa6.77□□□□□ -1.33
NIFKP3-201ENST00000417799 LAMA4Q16363 1823 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 TSPY2A6NKD2 308 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 ADM5C9JUS6 153 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 IFIT3O14879 490 aaKnown RBP6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 CYP7B1O75881 506 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 PCDH8O95206 1070 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 PFKMP08237 780 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 TSPY3P0CV98 308 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 TSPY8P0CW00 308 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 AKR1B1P15121 316 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 GLDCP23378 1020 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 LIFRP42702 1097 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 RECQLP46063 649 aaPredicted RBP6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 MCM2P49736 904 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 MRPS9P82933 396 aaKnown RBP6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 CD83Q01151 205 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 TOB2Q14106 344 aaPredicted RBP6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 ACAP2Q15057 778 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 ANKRD1Q15327 319 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 CERKLQ49MI3 558 aaPredicted RBP6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 KANK2Q63ZY3 851 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 MCTP1Q6DN14 999 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 CXXC5Q7LFL8 322 aaKnown RBP6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 IQCA1Q86XH1 822 aa6.76□□□□□ -1.33
NIFKP3-201ENST00000417799 ZNF526Q8TF50 670 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms