RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DMP1Q13316 513 aaPredicted RBP19.54■□□□□ 0.72
VCP-202ENST00000417448 LRRC32Q14392 662 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 PPP2R5AQ15172 486 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 UPP1Q16831 310 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 PLA2G2CQ5R387 149 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 EEF1DP3Q658K8 133 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 PSAPL1Q6NUJ1 521 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 MFSD6LQ8IWD5 586 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 TCEAL8Q8IYN2 117 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 KDF1Q8NAX2 398 aaPredicted RBP19.54■□□□□ 0.72
VCP-202ENST00000417448 ZSCAN18Q8TBC5 510 aaPredicted RBP19.54■□□□□ 0.72
VCP-202ENST00000417448 DNAJC19Q96DA6 116 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 PRIMPOLQ96LW4 560 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 IPO9Q96P70 1041 aaKnown RBP19.54■□□□□ 0.72
VCP-202ENST00000417448 FZD8Q9H461 694 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 TRPV4Q9HBA0 871 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 CYP4F11Q9HBI6 524 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 WASF3Q9UPY6 502 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 INSL5Q9Y5Q6 135 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 HEPACAM2A8MVW5 462 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 K7ERI5 159 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 IDEP14735 1019 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 ATF2P15336 505 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 HOXA6P31267 233 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 NDUFA8P51970 172 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 TMEM132AQ24JP5 1023 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 NT5DC1Q5TFE4 455 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 KBTBD6Q86V97 674 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 IQUBQ8NA54 791 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 PPP1R10Q96QC0 940 aaKnown RBP19.53■□□□□ 0.72
VCP-202ENST00000417448 TIPINQ9BVW5 301 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 C2orf40Q9H1Z8 148 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 BLZF1Q9H2G9 400 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 PRMT7Q9NVM4 692 aaPredicted RBP19.53■□□□□ 0.72
VCP-202ENST00000417448 KCND2Q9NZV8 630 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 CEP72Q9P209 647 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 GDAQ9Y2T3 454 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 ATG2BQ96BY7 2078 aa19.53■□□□□ 0.72
VCP-202ENST00000417448 LAMA5O15230 3695 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 GIPC1O14908 333 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 GADD45BO75293 160 aaPredicted RBP19.52■□□□□ 0.72
VCP-202ENST00000417448 TBCAO75347 108 aaKnown RBP19.52■□□□□ 0.72
VCP-202ENST00000417448 SPINK2P20155 84 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 ELF1P32519 619 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 PRPF4BQ13523 1007 aaKnown RBP19.52■□□□□ 0.72
VCP-202ENST00000417448 TEAD2Q15562 447 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 MAPK6Q16659 721 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 FAM187BQ17R55 369 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 TCEAL6Q6IPX3 200 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 SFR1Q86XK3 245 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 TCEAL3Q969E4 200 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 HPS3Q969F9 1004 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 LOXL4Q96JB6 756 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 IKZF4Q9H2S9 585 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 ARHGAP28Q9P2N2 729 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 ODF2LQ9ULJ1 636 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 ITPR1Q14643 2758 aa19.52■□□□□ 0.72
VCP-202ENST00000417448 NUP210Q8TEM1 1887 aaPredicted RBP19.52■□□□□ 0.71
VCP-202ENST00000417448 N4BP3O15049 544 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 ACTN4O43707 911 aaKnown RBP19.51■□□□□ 0.71
VCP-202ENST00000417448 PXNP49023 591 aaPredicted RBP19.51■□□□□ 0.71
VCP-202ENST00000417448 EPHA5P54756 1037 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 ARPP19P56211 112 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 CCINQ13939 588 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 ZC2HC1CQ53FD0 456 aaPredicted RBP19.51■□□□□ 0.71
VCP-202ENST00000417448 CYP4A22Q5TCH4 519 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 PKN3Q6P5Z2 889 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 TMEM161BQ8NDZ6 487 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 TTC8Q8TAM2 541 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 CSGALNACT1Q8TDX6 532 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 GAB3Q8WWW8 586 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 MSANTD3Q96H12 275 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 TARS2Q9BW92 718 aaKnown RBP19.51■□□□□ 0.71
VCP-202ENST00000417448 FGFBP2Q9BYJ0 223 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 PARVGQ9HBI0 331 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 KBTBD4Q9NVX7 518 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 HPSEQ9Y251 543 aa19.51■□□□□ 0.71
VCP-202ENST00000417448 SMG1Q96Q15 3661 aaKnown RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 MYBPHLA2RUH7 354 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 SPECC1L-ADORA2AF8WAN1 911 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 K7ENM7 598 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 ACKR2O00590 384 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 EXTL3O43909 919 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 TOP3BO95985 862 aaKnown RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 MAPTP10636 758 aaKnown RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 MYL4P12829 197 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 CTHP32929 405 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 ZNF131P52739 623 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 SOX4Q06945 474 aaPredicted RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 FCHO2Q0JRZ9 810 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 DGKKQ5KSL6 1271 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 HAUS6Q7Z4H7 955 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 SPIRE2Q8WWL2 714 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 ZBTB45Q96K62 511 aaPredicted RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 FIZ1Q96SL8 496 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 NTPCRQ9BSD7 190 aaKnown RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 C8orf33Q9H7E9 229 aaPredicted RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 PANK4Q9NVE7 773 aa19.5■□□□□ 0.71
VCP-202ENST00000417448 SETXQ7Z333 2677 aaKnown RBP19.5■□□□□ 0.71
VCP-202ENST00000417448 A0A1W2PQ27 194 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms