RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ATICP31939 592 aa19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 DPH6Q7L8W6 267 aa19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 TCEAL8Q8IYN2 117 aa19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 PDCL2Q8N4E4 241 aa19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 KHSRPQ92945 711 aaKnown RBP eCLIP19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 SYAP1Q96A49 352 aaPredicted RBP19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 ZNF707Q96C28 371 aaPredicted RBP19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 CYP4F11Q9HBI6 524 aa19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 L1RE1Q9UN81 338 aa19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 NR2E1Q9Y466 385 aa19.35■□□□□ 0.69
SEMA3B-201ENST00000416295 BICDL2A1A5D9 508 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 STAU1O95793 577 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 BMP6P22004 513 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 DLG4P78352 724 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 ADCY1Q08828 1119 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 GPR17Q13304 367 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 TDRD10Q5VZ19 366 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 ANKRD40Q6AI12 368 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 SCARA3Q6AZY7 606 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 FOXR2Q6PJQ5 311 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 ZC3H3Q8IXZ2 948 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 OR10T2Q8NGX3 314 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 LRFN3Q9BTN0 628 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 NUP62CLQ9H1M0 184 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 TSC2P49815 1807 aa19.34■□□□□ 0.69
SEMA3B-201ENST00000416295 LOC730098B7Z3J9 87 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 PPP1R3GB7ZBB8 358 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 SLC16A3O15427 465 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 CST3P01034 146 aaPredicted RBP19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 LRG1P02750 347 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 C4BPAP04003 597 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 OR4Q2P0C623 313 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 CD44P16070 742 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 LHX1P48742 406 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 PMS1P54277 932 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 ZACNQ401N2 412 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 KLHL10Q6JEL2 608 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 RNF19BQ6ZMZ0 732 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 ADGRF2Q8IZF7 708 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 EEF2KMTQ96G04 330 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 RPGRIP1Q96KN7 1286 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 ZCWPW1Q9H0M4 648 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 WDR6Q9NNW5 1121 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 USTQ9Y2C2 406 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 HCN4Q9Y3Q4 1203 aa19.33■□□□□ 0.68
SEMA3B-201ENST00000416295 CLUHO75153 1309 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 MTCL1Q9Y4B5 1905 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 TRIM49BA6NDI0 452 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 CCL16O15467 120 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 DCXO43602 365 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 MYL6P60660 151 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 TNNC1P63316 161 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 MYL7Q01449 175 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 TSPY1Q01534 308 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 SMARCB1Q12824 385 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 PAK1Q13153 545 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 NCOA4Q13772 614 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 SOWAHAQ2M3V2 549 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 SV2AQ7L0J3 742 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 NELFBQ8WX92 580 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 MMS19Q96T76 1030 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 RTP3Q9BQQ7 232 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 XYLT2Q9H1B5 865 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 VRTNQ9H8Y1 702 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 DDX43Q9NXZ2 648 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 HSFX1Q9UBD0 423 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 POLIQ9UNA4 740 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 CTNND2Q9UQB3 1225 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 INSL5Q9Y5Q6 135 aa19.32■□□□□ 0.68
SEMA3B-201ENST00000416295 GABRDO14764 452 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 STX10O60499 249 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 CLSTN1O94985 981 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 SEC24AO95486 1093 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 TRIM49P0CI25 452 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 TRIM49CP0CI26 452 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 PCSK1P29120 753 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 GTF2H1P32780 548 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 MCCD1P59942 119 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 ZNF699Q32M78 642 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 WDR72Q3MJ13 1102 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 C1orf220Q5T0J3 134 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 LIMS2Q7Z4I7 341 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 DCP1BQ8IZD4 617 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 TDRD5Q8NAT2 981 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 C2orf15Q8WU43 125 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 CEP63Q96MT8 703 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 PGLYRP2Q96PD5 576 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 TMEM209Q96SK2 561 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 ACBD6Q9BR61 282 aa19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 ARIH1Q9Y4X5 557 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-201ENST00000416295 MTMR11A4FU01 709 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 PRR33A8MZF0 331 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 FAM163BP0C2L3 166 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 PIK3CAP42336 1068 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 PLD1Q13393 1074 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 SGSM1Q2NKQ1 1148 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 SLC39A12Q504Y0 691 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 TTI2Q6NXR4 508 aa19.3■□□□□ 0.68
SEMA3B-201ENST00000416295 OTOP3Q7RTS5 596 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms