RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 BARX2Q9UMQ3 279 aaPredicted RBP14.21□□□□□ -0.13
CNN3-203ENST00000415017 SF3B1O75533 1304 aaKnown RBP eCLIP14.2□□□□□ -0.14
CNN3-203ENST00000415017 ARHGEF37A1IGU5 675 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 LRRC53A6NM62 1247 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 NT5C1B-RDH14C9J2C7 533 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 TULP1O00294 542 aaPredicted RBP14.2□□□□□ -0.14
CNN3-203ENST00000415017 HUS1O60921 280 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 TADA2AO75478 443 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 RB1P06400 928 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 ODC1P11926 461 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 MYOGP15173 224 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 KRT9P35527 623 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 SOX5P35711 763 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 PRKCIP41743 596 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 ERVK-21P61565 698 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 YWHAEP62258 255 aaKnown RBP14.2□□□□□ -0.14
CNN3-203ENST00000415017 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
CNN3-203ENST00000415017 CDK17Q00537 523 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 TAP1Q03518 808 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 WSCD1Q658N2 575 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 HGSNATQ68CP4 663 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.2□□□□□ -0.14
CNN3-203ENST00000415017 PPFIBP1Q86W92 1011 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 CNGA4Q8IV77 575 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 PCMTD1Q96MG8 357 aaPredicted RBP14.2□□□□□ -0.14
CNN3-203ENST00000415017 SAMD11Q96NU1 681 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 PKMYT1Q99640 499 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 PBX4Q9BYU1 374 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 DSEQ9UL01 958 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 LZTS1Q9Y250 596 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 STXBP5LQ9Y2K9 1186 aa14.2□□□□□ -0.14
CNN3-203ENST00000415017 AKR1B15C9JRZ8 316 aaPredicted RBP14.19□□□□□ -0.14
CNN3-203ENST00000415017 I3L4J1 428 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 LILRB3O75022 631 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 SOD2P04179 222 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 CA3P07451 260 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 STAT1P42224 750 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 RAP1GAPP47736 663 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 LHX1P48742 406 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 RAD23BP54727 409 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 ARHGAP44Q17R89 818 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 KIAA0319Q5VV43 1072 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 DSTYKQ6XUX3 929 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 TAS1R1Q7RTX1 841 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 CACNA2D4Q7Z3S7 1137 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 FMNL3Q8IVF7 1028 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 ADGRF2Q8IZF7 708 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 SLC4A11Q8NBS3 891 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 OR8K1Q8NGG5 319 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 HASPINQ8TF76 798 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 PANX2Q96RD6 677 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 TWNKQ96RR1 684 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 MMS19Q96T76 1030 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 HERC2P3Q9BVR0 1158 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 ELOVL4Q9GZR5 314 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 ABHD10Q9NUJ1 306 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 HMGXB4Q9UGU5 601 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 PCDHB12Q9Y5F1 795 aa14.19□□□□□ -0.14
CNN3-203ENST00000415017 MTCL1Q9Y4B5 1905 aaKnown RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 FGF18O76093 207 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 PAEPP09466 180 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 PNMA6AP0CW24 399 aaPredicted RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 FERP16591 822 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 LMO2P25791 158 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 PBX2P40425 430 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 NDST1P52848 882 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 ADKP55263 362 aaKnown RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 GSDMDP57764 484 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 DSG1Q02413 1049 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 CCDC173Q0VFZ6 552 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 RAPGEF1Q13905 1077 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 RAB30Q15771 203 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 USP41Q3LFD5 358 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 LRIT3Q3SXY7 679 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 RTP2Q5QGT7 225 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 SCARA5Q6ZMJ2 495 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 SPRED2Q7Z698 418 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 TMEM139Q8IV31 216 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 KLHL23Q8NBE8 558 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 ZNF397Q8NF99 534 aaPredicted RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 LNX1Q8TBB1 728 aaPredicted RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 CPLX3Q8WVH0 158 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 PIK3R5Q8WYR1 880 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 DDX1Q92499 740 aaKnown RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 ANP32BQ92688 251 aaKnown RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 SPAG5Q96R06 1193 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 ZSWIM1Q9BR11 485 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 ACBD6Q9BR61 282 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 C17orf80Q9BSJ5 609 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 OXCT2Q9BYC2 517 aaPredicted RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 NOCTQ9UK39 431 aaKnown RBP14.18□□□□□ -0.14
CNN3-203ENST00000415017 KIAA1257Q9ULG3 409 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 IRAK3Q9Y616 596 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 PATJQ8NI35 1801 aa14.18□□□□□ -0.14
CNN3-203ENST00000415017 GNL1P36915 607 aaPredicted RBP14.17□□□□□ -0.14
CNN3-203ENST00000415017 UBE3AQ05086 875 aa14.17□□□□□ -0.14
CNN3-203ENST00000415017 CAMK1Q14012 370 aa14.17□□□□□ -0.14
CNN3-203ENST00000415017 ASTE1Q2TB18 679 aaPredicted RBP14.17□□□□□ -0.14
CNN3-203ENST00000415017 VARS2Q5ST30 1063 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms