RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SENP8Q96LD8 212 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
LIMS2-210ENST00000413578 PDCD11Q14690 1871 aaKnown RBP13.21□□□□□ -0.3
LIMS2-210ENST00000413578 CITO14578 2027 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 PIRO00625 290 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 OGTO15294 1046 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 FGF19O95750 216 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 PLA2G4BP0C869 781 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 ATF6P18850 670 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 PAX3P23760 479 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 GABRR2P28476 465 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 LIMK1P53667 647 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 PON2Q15165 354 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 KYAT1Q16773 422 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 GPR158Q5T848 1215 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 HEATR6Q6AI08 1181 aaKnown RBP13.2□□□□□ -0.3
LIMS2-210ENST00000413578 SLC39A4Q6P5W5 647 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 PKN3Q6P5Z2 889 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 DSTYKQ6XUX3 929 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 TTC8Q8TAM2 541 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 LRRC15Q8TF66 581 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-210ENST00000413578 FIZ1Q96SL8 496 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 KIF2CQ99661 725 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 LPIN3Q9BQK8 851 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 TASP1Q9H6P5 420 aa13.2□□□□□ -0.3
LIMS2-210ENST00000413578 SH2B1Q9NRF2 756 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-210ENST00000413578 LARSQ9P2J5 1176 aaKnown RBP13.2□□□□□ -0.3
LIMS2-210ENST00000413578 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
LIMS2-210ENST00000413578 CHD6Q8TD26 2715 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 A0A0B4J269 797 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 CCDC163A0A0D9SF12 145 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 H0YCG3 227 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 DPYSL4O14531 572 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 XPOTO43592 962 aaKnown RBP13.19□□□□□ -0.3
LIMS2-210ENST00000413578 EXTL3O43909 919 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 ODC1P11926 461 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 ZNF131P52739 623 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 CYP4F8P98187 520 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 ST3GAL2Q16842 350 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 TMEM196Q5HYL7 178 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 JADE1Q6IE81 842 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 TMEM150AQ86TG1 271 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 CD302Q8IX05 232 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 BPIFB1Q8TDL5 484 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 LOXL4Q96JB6 756 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 FAM83CQ9BQN1 747 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 TBX20Q9UMR3 447 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
LIMS2-210ENST00000413578 OTOL1A6NHN0 477 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-210ENST00000413578 HNRNPDLO14979 420 aaKnown RBP13.18□□□□□ -0.3
LIMS2-210ENST00000413578 EPN2O95208 641 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 NFICP08651 508 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 SCP2P22307 547 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 PMLP29590 882 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 CDC25CP30307 473 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 TUFMP49411 452 aaKnown RBP13.18□□□□□ -0.3
LIMS2-210ENST00000413578 MCM2P49736 904 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 LIG4P49917 911 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 ARHGAP15Q53QZ3 475 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 ARMCX5Q6P1M9 558 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 RIN3Q8TB24 985 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 GAB3Q8WWW8 586 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 DDX1Q92499 740 aaKnown RBP13.18□□□□□ -0.3
LIMS2-210ENST00000413578 PLIN2Q99541 437 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 SLC46A2Q9BY10 475 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 SMG9Q9H0W8 520 aaKnown RBP13.18□□□□□ -0.3
LIMS2-210ENST00000413578 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
LIMS2-210ENST00000413578 HPS4Q9NQG7 708 aa13.18□□□□□ -0.3
LIMS2-210ENST00000413578 CFAP47Q6ZTR5 3102 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 TRDMT1O14717 391 aaKnown RBP13.17□□□□□ -0.3
LIMS2-210ENST00000413578 EIF5BO60841 1220 aaKnown RBP13.17□□□□□ -0.3
LIMS2-210ENST00000413578 ZNF806P0C7X5 589 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 HMGA1P17096 107 aaKnown RBP13.17□□□□□ -0.3
LIMS2-210ENST00000413578 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
LIMS2-210ENST00000413578 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
LIMS2-210ENST00000413578 SLC39A12Q504Y0 691 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 PLA2G2CQ5R387 149 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
LIMS2-210ENST00000413578 FSTL4Q6MZW2 842 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 CEP68Q76N32 757 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 BICD1Q96G01 975 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 SEPT5Q99719 369 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms