RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 PRO3102Q9H379 93 aa27.72■■■□□ 2.03
RHBDD3-203ENST00000413137 PCDHB8Q9UN66 801 aa27.72■■■□□ 2.03
RHBDD3-203ENST00000413137 ODC1P11926 461 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 FAM171A1Q5VUB5 890 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 SFMBT2Q5VUG0 894 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 WDR59Q6PJI9 974 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 IRF2BP2Q7Z5L9 587 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 OR6B3Q8NGW1 331 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 PBX4Q9BYU1 374 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 SPG21Q9NZD8 308 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 MYO6Q9UM54 1294 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 BARX2Q9UMQ3 279 aaPredicted RBP27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 KIAA1671Q9BY89 1806 aa27.71■■■□□ 2.03
RHBDD3-203ENST00000413137 GABRDO14764 452 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 CYP11A1P05108 521 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 PDGFRBP09619 1106 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 SKILP12757 684 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 WARSP23381 471 aaKnown RBP27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 PAX3P23760 479 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 GNL1P36915 607 aaPredicted RBP27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 ZNF132P52740 706 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 TDHQ8IZJ6 230 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 RBBP8NLQ8NC74 664 aaPredicted RBP27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 RTP3Q9BQQ7 232 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 C17orf80Q9BSJ5 609 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 AIPL1Q9NZN9 384 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 PCDHA11Q9Y5I1 949 aa27.7■■■□□ 2.03
RHBDD3-203ENST00000413137 SF3B1O75533 1304 aaKnown RBP eCLIP27.7■■■□□ 2.028e-6■■■■■ 107
RHBDD3-203ENST00000413137 CHD9Q3L8U1 2897 aa27.7■■■□□ 2.02
RHBDD3-203ENST00000413137 TRAPPC3O43617 180 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 RAD23BP54727 409 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 SLC47A2Q86VL8 602 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 CEP57Q86XR8 500 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 RNF168Q8IYW5 571 aaPredicted RBP27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 LPIN3Q9BQK8 851 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 DPEP3Q9H4B8 488 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 PCDHB12Q9Y5F1 795 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 ACAT1P24752 427 aaKnown RBP27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 TMEM86AQ8N2M4 240 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 KLHL23Q8NBE8 558 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 SLC4A11Q8NBS3 891 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 SNX25Q9H3E2 840 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 AAASQ9NRG9 546 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 STXBP5LQ9Y2K9 1186 aa27.69■■■□□ 2.02
RHBDD3-203ENST00000413137 TYMPP19971 482 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 FGFR3P22607 806 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 HNRNPH3P31942 346 aaKnown RBP27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 BMPR1AP36894 532 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 YWHAEP62258 255 aaKnown RBP27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 ASIC2Q16515 512 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 CCDC142Q17RM4 750 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 RTP2Q5QGT7 225 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 KIAA0319Q5VV43 1072 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 SYN2Q92777 582 aaPredicted RBP27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 TMEM169Q96HH4 297 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 MTUS1Q9ULD2 1270 aa27.68■■■□□ 2.02
RHBDD3-203ENST00000413137 CHD7Q9P2D1 2997 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 A8MXQ7 604 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 GOLGA6L6A8MZA4 724 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 FGF18O76093 207 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 PLEKP08567 350 aaPredicted RBP27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 CTNNB1P35222 781 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 CDR1P51861 262 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 GSDMDP57764 484 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 HGSNATQ68CP4 663 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 PANX2Q96RD6 677 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 CHP1Q99653 195 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 ZSWIM1Q9BR11 485 aa27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 NUCKS1Q9H1E3 243 aaKnown RBP27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 DDX43Q9NXZ2 648 aaKnown RBP27.67■■■□□ 2.02
RHBDD3-203ENST00000413137 SYN3O14994 580 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 ATP2C2O75185 946 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 FAM163BP0C2L3 166 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 VARS2Q5ST30 1063 aaKnown RBP27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 OVOS1Q6IE37 1185 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 ACOT1Q86TX2 421 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 TMEM176AQ96HP8 235 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 DSEQ9UL01 958 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 VWA8A3KMH1 1905 aa27.66■■■□□ 2.02
RHBDD3-203ENST00000413137 PTMAP06454 111 aaKnown RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 FERP16591 822 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 TAP1Q03518 808 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 YWHAHQ04917 246 aaPredicted RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 ELAVL2Q12926 359 aaKnown RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 MEA1Q16626 185 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 NOP9Q86U38 636 aaKnown RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 METTL23Q86XA0 190 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 TMEM139Q8IV31 216 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 OR10T2Q8NGX3 314 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 TFAP2BQ92481 460 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 TMEM209Q96SK2 561 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 NT5C1AQ9BXI3 368 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 NKX2-4Q9H2Z4 354 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 ARHGAP20Q9P2F6 1191 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 PPM1AP35813 382 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 LHX1P48742 406 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 PSMC1P62191 440 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms