RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TRPC3Q13507 836 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 NCOA4Q13772 614 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SOWAHAQ2M3V2 549 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CBWD6Q4V339 395 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CBWD3Q5JTY5 395 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CBWD5Q5RIA9 395 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CCDC183Q5T5S1 534 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 TCERG1LQ5VWI1 586 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SLC8B1Q6J4K2 584 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CAVIN1Q6NZI2 390 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SCARA5Q6ZMJ2 495 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 USP37Q86T82 979 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 PPFIBP1Q86W92 1011 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 GPR65Q8IYL9 337 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SMRP1Q8NCR6 262 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 KREMEN2Q8NCW0 462 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 APPL2Q8NEU8 664 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 TAS1R2Q8TE23 839 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 KBTBD7Q8WVZ9 684 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 ATXN2LQ8WWM7 1075 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SEMA4DQ92854 862 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 MRPL45Q9BRJ2 306 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SRRTQ9BXP5 876 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 GTPBP4Q9BZE4 634 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SDCBP2Q9H190 292 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CRISPLD1Q9H336 500 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 APOBEC3GQ9HC16 384 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 GDAP2Q9NXN4 497 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 NXF1Q9UBU9 619 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 USP15Q9Y4E8 981 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 BRWD1Q9NSI6 2320 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 DENND4AQ7Z401 1863 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 COL6A3P12111 3177 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 BICDL2A1A5D9 508 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 H7C4K7 107 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 SLC16A3O15427 465 aaKnown RBP8.28□□□□□ -1.08
CPSF4-202ENST00000412686 CCL16O15467 120 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 SOAT2O75908 522 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 SRGAP2BP0DMP2 458 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 CPB1P15086 417 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 LMO2P25791 158 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 PIK3CAP42336 1068 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 CDH8P55286 799 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 CREMQ03060 361 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ADCY1Q08828 1119 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 MYO1EQ12965 1108 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ZNF699Q32M78 642 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 WDR72Q3MJ13 1102 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 CCDC40Q4G0X9 1142 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 HSP90AA4PQ58FG1 418 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 PDXDC1Q6P996 788 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 C11orf57Q6ZUT1 292 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-202ENST00000412686 LRRTM3Q86VH5 581 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 METTL23Q86XA0 190 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 CREBRFQ8IUR6 639 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ADGRF2Q8IZF7 708 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 MLKLQ8NB16 471 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ATAD1Q8NBU5 361 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ZNF461Q8TAF7 563 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 SLC7A14Q8TBB6 771 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 SLC35C1Q96A29 364 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ZNF707Q96C28 371 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-202ENST00000412686 CEP63Q96MT8 703 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 MMS19Q96T76 1030 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 LPIN3Q9BQK8 851 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ZCWPW1Q9H0M4 648 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 SMYD3Q9H7B4 428 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 SFXN1Q9H9B4 322 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 TMEM8AQ9HCN3 771 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 TMLHEQ9NVH6 421 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 DDX43Q9NXZ2 648 aaKnown RBP8.28□□□□□ -1.08
CPSF4-202ENST00000412686 ARMCX3Q9UH62 379 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-202ENST00000412686 RWDD2AQ9UIY3 292 aa8.28□□□□□ -1.08
CPSF4-202ENST00000412686 R3HCC1Q9Y3T6 440 aaKnown RBP8.28□□□□□ -1.08
CPSF4-202ENST00000412686 DOCK6Q96HP0 2047 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 CCDC195A0A1B0GUA6 201 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 FSD2A1L4K1 749 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 MTMR11A4FU01 709 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 OR6C75A6NL08 312 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 GABRDO14764 452 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 IKBKBO14920 756 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 HUS1O60921 280 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 ATP2C2O75185 946 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 ZMYND10O75800 440 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 ABLIM3O94929 683 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 STAU1O95793 577 aaKnown RBP8.27□□□□□ -1.09
CPSF4-202ENST00000412686 ASS1P00966 412 aaKnown RBP8.27□□□□□ -1.09
CPSF4-202ENST00000412686 PDGFRBP09619 1106 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 HOXB8P17481 243 aaPredicted RBP8.27□□□□□ -1.09
CPSF4-202ENST00000412686 MXI1P50539 228 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 AP3M2P53677 418 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 PSMC1P62191 440 aaKnown RBP8.27□□□□□ -1.09
CPSF4-202ENST00000412686 TNNC1P63316 161 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 NOP14P78316 857 aaKnown RBP8.27□□□□□ -1.09
CPSF4-202ENST00000412686 NTHL1P78549 312 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 ORC1Q13415 861 aa8.27□□□□□ -1.09
CPSF4-202ENST00000412686 SMAD2Q15796 467 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms