RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 P2RY13Q9BPV8 354 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 HSD17B14Q9BPX1 270 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 EIF2AK1Q9BQI3 630 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ESYT1Q9BSJ8 1104 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC94Q9BW85 323 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GTPBP2Q9BX10 602 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRRC3Q9BY71 257 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TPSD1Q9BZJ3 242 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 POLR3FQ9H1D9 316 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DNAJC25Q9H1X3 360 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 EBF3Q9H4W6 596 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GOLGA2P5Q9HBQ8 144 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 FBRSL1Q9HCM7 1045 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SCUBE2Q9NQ36 999 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GPRC5CQ9NQ84 441 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 HPS4Q9NQG7 708 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 POLR3BQ9NW08 1133 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CACNA2D2Q9NY47 1150 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 HSFX1Q9UBD0 423 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CIZ1Q9ULV3 898 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PCDHB8Q9UN66 801 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PCDHA12Q9UN75 941 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC6A14Q9UN76 642 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TNFSF13BQ9Y275 285 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 INVSQ9Y283 1065 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PCDHB9Q9Y5E1 797 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 MYH15Q9Y2K3 1946 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 MTCL1Q9Y4B5 1905 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CREBBPQ92793 2442 aa2.59□□□□□ -2
RNU4-53P-201ENST00000410828 ASPMQ8IZT6 3477 aa2.59□□□□□ -2
RNU4-53P-201ENST00000410828 PI4KAP42356 2102 aa2.59□□□□□ -2
RNU4-53P-201ENST00000410828 PATJQ8NI35 1801 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ATG2BQ96BY7 2078 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 A0A087WWV3 80 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MTMR11A4FU01 709 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CAPN8A6NHC0 703 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 OTOL1A6NHN0 477 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 M0QZQ0 153 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 AP5Z1O43299 807 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 DEXIO95424 95 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SYPP08247 313 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SERPINF2P08697 491 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 OR4Q2P0C623 313 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MCF2P10911 925 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ARSAP15289 507 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 XBP1P17861 261 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CYP11B2P19099 503 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 BCKDHBP21953 392 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 DDX6P26196 483 aaKnown RBP eCLIP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PDIA3P30101 505 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 HSPA4P34932 840 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 GJA4P35212 333 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 P2RY2P41231 377 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TXKP42681 527 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PTGER3P43115 390 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TUFMP49411 452 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 EVCP57679 992 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 OSTNP61366 133 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 FAM193AP78312 1265 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CCT2P78371 535 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CYP4F8P98187 520 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 FAM160A1Q05DH4 1040 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SMARCB1Q12824 385 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 NR1H3Q13133 447 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SLC14A1Q13336 389 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MYBPC2Q14324 1141 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF268Q14587 947 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PDGFRLQ15198 375 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 NPY5RQ15761 445 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CRY1Q16526 586 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MGAT5BQ3V5L5 792 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF568Q3ZCX4 644 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SPDYCQ5MJ68 293 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ATF7IP2Q5U623 682 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 LYSMD4Q5XG99 296 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TRIM68Q6AZZ1 485 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ARMCX5Q6P1M9 558 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CPLX2Q6PUV4 134 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 BLOC1S2Q6QNY1 142 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PADI6Q6TGC4 694 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ALKAL1Q6UXT8 129 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 DSTYKQ6XUX3 929 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CCNI2Q6ZMN8 369 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PIK3AP1Q6ZUJ8 805 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ARMCX6Q7L4S7 300 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF605Q86T29 641 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TTC30AQ86WT1 665 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SCUBE3Q8IX30 993 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TMEFF1Q8IYR6 380 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 RASEFQ8IZ41 740 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 FBXL16Q8N461 479 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CPA6Q8N4T0 437 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MINDY1Q8N5J2 469 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PNPLA1Q8N8W4 532 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MAB21L3Q8N8X9 362 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CEP120Q8N960 986 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ATAD1Q8NBU5 361 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 LSM14AQ8ND56 463 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms