RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ZNF142P52746 1687 aaPredicted RBP5.59□□□□□ -1.52
CLK1-203ENST00000409769 NEXMIFQ5QGS0 1516 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 MYOM2P54296 1465 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 NLRP1Q9C000 1473 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 NRXN1Q9ULB1 1477 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 UNC119BA6NIH7 251 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 DRGXA6NNA5 263 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 WNT10BO00744 389 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 GPR32O75388 356 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 AMY1AP04745 511 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 FDXRP22570 491 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 AKAP5P24588 427 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 KIF23Q02241 960 aaPredicted RBP5.58□□□□□ -1.52
CLK1-203ENST00000409769 IDI1Q13907 227 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 PPP4R3AQ6IN85 833 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 PRR18Q8N4B5 295 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 ASB10Q8WXI3 467 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 DPF2Q92785 391 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 FUBP1Q96AE4 644 aaKnown RBP5.58□□□□□ -1.52
CLK1-203ENST00000409769 TEX101Q9BY14 249 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 SENP6Q9GZR1 1112 aaPredicted RBP5.58□□□□□ -1.52
CLK1-203ENST00000409769 WDR26Q9H7D7 661 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 SLC52A1Q9NWF4 448 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 TRPM1Q7Z4N2 1603 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 A2ML1A8K2U0 1454 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 PTPRMP28827 1452 aa5.58□□□□□ -1.52
CLK1-203ENST00000409769 KIAA1210Q9ULL0 1709 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 TNRQ92752 1358 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 CCDC154A6NI56 674 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 RPLP2P05387 115 aaKnown RBP5.57□□□□□ -1.52
CLK1-203ENST00000409769 ITGAMP11215 1152 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 PCSK1P29120 753 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 CHN2P52757 468 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 CTXN1P60606 82 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 PLEKHG6Q3KR16 790 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 DACT2Q5SW24 774 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 AFMIDQ63HM1 303 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 MAPKAPK5Q8IW41 473 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 FAM43AQ8N2R8 423 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 MIER2Q8N344 545 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 SLC35B2Q8TB61 432 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 NSUN6Q8TEA1 469 aaKnown RBP5.57□□□□□ -1.52
CLK1-203ENST00000409769 HOOK2Q96ED9 719 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 CALCOCO1Q9P1Z2 691 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 SERPINB13Q9UIV8 391 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 AJAP1Q9UKB5 411 aaPredicted RBP5.57□□□□□ -1.52
CLK1-203ENST00000409769 TLK1Q9UKI8 766 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 ANKRD6Q9Y2G4 727 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 LUC7L2Q9Y383 392 aaKnown RBP5.57□□□□□ -1.52
CLK1-203ENST00000409769 ZFYVE9O95405 1425 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 PRAG1Q86YV5 1406 aa5.57□□□□□ -1.52
CLK1-203ENST00000409769 LAMC1P11047 1609 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 PNPLA7Q6ZV29 1317 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 MYBBP1AQ9BQG0 1328 aaKnown RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 CEP170BQ9Y4F5 1589 aaPredicted RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 INO80B-WBP1J3KQ70 363 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 ZNF37AP17032 561 aaPredicted RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 DDCP20711 480 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 MPLP40238 635 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 FXR1P51114 621 aaKnown RBP eCLIP5.56□□□□□ -1.52
CLK1-203ENST00000409769 TARDBPQ13148 414 aaKnown RBP eCLIP5.56□□□□□ -1.52
CLK1-203ENST00000409769 PIN1Q13526 163 aaPredicted RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 RAB39AQ14964 217 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 NBPF8Q3BBV2 869 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 C3orf36Q3SXR2 165 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 RHOT1Q8IXI2 618 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 ZGPATQ8N5A5 531 aaKnown RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 BOLLQ8N9W6 283 aaKnown RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 OR56A1Q8NGH5 318 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 IFI44Q8TCB0 444 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 HSPBAP1Q96EW2 488 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 BOD1Q96IK1 185 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 MRGPRX4Q96LA9 322 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 DMRTA2Q96SC8 542 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 MRI1Q9BV20 369 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 DUSP26Q9BV47 211 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 INO80BQ9C086 356 aaPredicted RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 RNPEPQ9H4A4 650 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 PRDM13Q9H4Q3 707 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 TMEM74BQ9NUR3 256 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 TESQ9UGI8 421 aaKnown RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 PNMA8BQ9ULN7 279 aaPredicted RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 SETD1AO15047 1707 aaKnown RBP5.56□□□□□ -1.52
CLK1-203ENST00000409769 RALGAPBQ86X10 1494 aa5.56□□□□□ -1.52
CLK1-203ENST00000409769 RPGRIP1LQ68CZ1 1315 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 SLIT1O75093 1534 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 AKAP10O43572 662 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 RFPL1O75677 317 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 POU2F2P09086 479 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 ATP5JP18859 108 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 FPR1P21462 350 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 ALDH1A3P47895 512 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 DSC2Q02487 901 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 TTC7BQ86TV6 843 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 TMEM132CQ8N3T6 1108 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 NEU1Q99519 415 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 SPATA5L1Q9BVQ7 753 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 CDH19Q9H159 772 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 LDAHQ9H6V9 325 aa5.55□□□□□ -1.52
CLK1-203ENST00000409769 RSAD1Q9HA92 442 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms