RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 PPM1KQ8N3J5 372 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 MRPL38Q96DV4 380 aaKnown RBP17.79■□□□□ 0.44
SUMO1-208ENST00000409627 FAM81BQ96LP2 452 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 LSM14BQ9BX40 385 aaKnown RBP17.79■□□□□ 0.44
SUMO1-208ENST00000409627 OXCT2Q9BYC2 517 aaPredicted RBP17.79■□□□□ 0.44
SUMO1-208ENST00000409627 SDCBP2Q9H190 292 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 PRDM12Q9H4Q4 367 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.79■□□□□ 0.44
SUMO1-208ENST00000409627 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 BACE2Q9Y5Z0 518 aa17.79■□□□□ 0.44
SUMO1-208ENST00000409627 A0A1W2PQC6 194 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 TBC1D4O60343 1298 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 TPM3P06753 285 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 RFX1P22670 979 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 IRS1P35568 1242 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 RAP1GAPP47736 663 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 LHX1P48742 406 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 INCA1Q0VD86 236 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 PLPP4Q5VZY2 271 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 PRSS55Q6UWB4 352 aaPredicted RBP17.78■□□□□ 0.44
SUMO1-208ENST00000409627 ENOSF1Q7L5Y1 443 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 OSTM1Q86WC4 334 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 JAKMIP2Q96AA8 810 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 ARID3AQ99856 593 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 MRPL45Q9BRJ2 306 aaKnown RBP17.78■□□□□ 0.44
SUMO1-208ENST00000409627 XPO4Q9C0E2 1151 aaKnown RBP17.78■□□□□ 0.44
SUMO1-208ENST00000409627 RXFP1Q9HBX9 757 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 LMCD1Q9NZU5 365 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 FNIP2Q9P278 1114 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 DAAM1Q9Y4D1 1078 aa17.78■□□□□ 0.44
SUMO1-208ENST00000409627 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.77■□□□□ 0.44
SUMO1-208ENST00000409627 C2orf71A6NGG8 1288 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 C2CD2LO14523 706 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 CXCL14O95715 111 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 WEE2P0C1S8 567 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 KLK7P49862 253 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 CDH8P55286 799 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 YWHAEP62258 255 aaKnown RBP17.77■□□□□ 0.44
SUMO1-208ENST00000409627 CTXN3Q4LDR2 81 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 KLHDC7AQ5VTJ3 777 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 SMYD5Q6GMV2 418 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 THEM5Q8N1Q8 247 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 UBR7Q8N806 425 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 MRPL43Q8N983 215 aaKnown RBP17.77■□□□□ 0.44
SUMO1-208ENST00000409627 MICAL1Q8TDZ2 1067 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 AUTS2Q8WXX7 1259 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 RTP3Q9BQQ7 232 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 SNX25Q9H3E2 840 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 UBE2TQ9NPD8 197 aaPredicted RBP17.77■□□□□ 0.44
SUMO1-208ENST00000409627 FBXL5Q9UKA1 691 aa17.77■□□□□ 0.44
SUMO1-208ENST00000409627 OR6C75A6NL08 312 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 POU3F3P20264 500 aaPredicted RBP17.76■□□□□ 0.43
SUMO1-208ENST00000409627 PCSK1P29120 753 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 GNL1P36915 607 aaPredicted RBP17.76■□□□□ 0.43
SUMO1-208ENST00000409627 PBX1P40424 430 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 FXR1P51114 621 aaKnown RBP eCLIP17.76■□□□□ 0.43
SUMO1-208ENST00000409627 MFAP3P55082 362 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 APBA1Q02410 837 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 SLC8B1Q6J4K2 584 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 RRAGAQ7L523 313 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 UNC93AQ86WB7 457 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 OR6B3Q8NGW1 331 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 KAT5Q92993 513 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
SUMO1-208ENST00000409627 KREMEN1Q96MU8 473 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 ACBD6Q9BR61 282 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 EMILIN2Q9BXX0 1053 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 GANQ9H2C0 597 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 CISHQ9NSE2 258 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 DDX43Q9NXZ2 648 aaKnown RBP17.76■□□□□ 0.43
SUMO1-208ENST00000409627 BARX2Q9UMQ3 279 aaPredicted RBP17.76■□□□□ 0.43
SUMO1-208ENST00000409627 STXBP5LQ9Y2K9 1186 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 PCDHGC5Q9Y5F6 944 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 TRANK1O15050 2925 aa17.76■□□□□ 0.43
SUMO1-208ENST00000409627 PLXNA3P51805 1871 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 MYO9BQ13459 2157 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 HIDE1A8MVS5 230 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 AP5Z1O43299 807 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 CILPO75339 1184 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 NOL4O94818 638 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 CSPG5O95196 566 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 UCHL3P15374 230 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 CD58P19256 250 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 CA8P35219 290 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 NDUFV1P49821 464 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 PLCB2Q00722 1185 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 IQCEQ6IPM2 695 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 NEK11Q8NG66 645 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 OR10T2Q8NGX3 314 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 FAM161BQ96MY7 647 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 CLSTN3Q9BQT9 956 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 NAA15Q9BXJ9 866 aaKnown RBP17.75■□□□□ 0.43
SUMO1-208ENST00000409627 FAM207AQ9NSI2 230 aaPredicted RBP17.75■□□□□ 0.43
SUMO1-208ENST00000409627 DNAJC12Q9UKB3 198 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 CDH9Q9ULB4 789 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 NME7Q9Y5B8 376 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 CDY1Q9Y6F8 540 aa17.75■□□□□ 0.43
SUMO1-208ENST00000409627 A8MXQ7 604 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms