RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ASAH2Q9NR71 780 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 AGPAT3Q9NRZ7 376 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 USP25Q9UHP3 1055 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 CA14Q9ULX7 337 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 SLC27A5Q9Y2P5 690 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 ATP6V1DQ9Y5K8 247 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 TCHHQ07283 1943 aa21.14■□□□□ 0.97
TSPAN4-209ENST00000409543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 ACTN4O43707 911 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 ECI2O75521 394 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 TMEM191BP0C7N4 346 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 RBP5P82980 135 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 SMARCB1Q12824 385 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 BMT2Q1RMZ1 405 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 SLC39A12Q504Y0 691 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 GRAMD1CQ8IYS0 662 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 PAGE5Q96GU1 130 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 KXD1Q9BQD3 176 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 MTMR12Q9C0I1 747 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 IRF2BPLQ9H1B7 796 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 DNAJC25Q9H1X3 360 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 SLC39A2Q9NP94 309 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 INTS13Q9NVM9 706 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 ASB3Q9Y575 518 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 PIEZO1Q92508 2521 aa21.13■□□□□ 0.97
TSPAN4-209ENST00000409543 A0A1B0GVL5 298 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 PI15O43692 258 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 MOSPD3O75425 235 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 MYL4P12829 197 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 PFKFB1P16118 471 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 TUFMP49411 452 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 PHLDB3Q6NSJ2 640 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 HS2ST1Q7LGA3 356 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 NELFCDQ8IXH7 590 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 C2orf15Q8WU43 125 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 ELSPBP1Q96BH3 223 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 ANKRD36BP1Q96IX9 119 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 CHAMP1Q96JM3 812 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 LRRC3Q9BY71 257 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 ARHGEF3Q9NR81 526 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 GDAP2Q9NXN4 497 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 CGNQ9P2M7 1197 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 SIX4Q9UIU6 781 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 HPSEQ9Y251 543 aa21.12■□□□□ 0.97
TSPAN4-209ENST00000409543 STK25O00506 426 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 NRG2O14511 850 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 KRT19P08727 400 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 BFSP1Q12934 665 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 SNRNP35Q16560 246 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 DUOXA2Q1HG44 320 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 FAM78AQ5JUQ0 283 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 SCARA3Q6AZY7 606 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 TANGO2Q6ICL3 276 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 LRRTM3Q86VH5 581 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 C12orf56Q8IXR9 622 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 DCP1BQ8IZD4 617 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 PDCL2Q8N4E4 241 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 TTC9BQ8N6N2 239 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 XXYLT1Q8NBI6 393 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 FAM84AQ96KN4 292 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 SCAND2PQ9GZW5 306 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 TBC1D17Q9HA65 648 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 CACNA1HO95180 2353 aa21.11■□□□□ 0.97
TSPAN4-209ENST00000409543 PTPRJQ12913 1337 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 FAM237AA0A1B0GTK4 181 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 KLRC4O43908 158 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 HUS1O60921 280 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 TNNC2P02585 160 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 RFX1P22670 979 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 FCARP24071 287 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 PFKPQ01813 784 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 KNOP1Q1ED39 458 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 LMBRD2Q68DH5 695 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 DNAJB7Q7Z6W7 309 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 ITIH5Q86UX2 942 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 TMC8Q8IU68 726 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 WDR49Q8IV35 697 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 TMEM86AQ8N2M4 240 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 OR5B17Q8NGF7 314 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 SHKBP1Q8TBC3 707 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 SPATA18Q8TC71 538 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 SPPL2BQ8TCT7 592 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 PSMG2Q969U7 264 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 SHDQ96IW2 340 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 ASB16Q96NS5 453 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 PLA2G2FQ9BZM2 168 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 GPR88Q9GZN0 384 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 ZFP14Q9HCL3 533 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 L1RE1Q9UN81 338 aa21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 R3HCC1Q9Y3T6 440 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-209ENST00000409543 CLIC2O15247 247 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 SOAT2O75908 522 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 MYL1P05976 194 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 GJA1P17302 382 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 CYP2J2P51589 502 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 STARD6P59095 220 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 MYO1EQ12965 1108 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 PSMD2Q13200 908 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 PSMD6Q15008 389 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 MGAT5BQ3V5L5 792 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms