RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 PNPLA4P41247 253 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
SHANK2-204ENST00000409530 UPP1Q16831 310 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 CCDC142Q17RM4 750 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 ADGRF2Q8IZF7 708 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 TMEM199Q8N511 208 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 APPL2Q8NEU8 664 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 BADQ92934 168 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
SHANK2-204ENST00000409530 CHORDC1Q9UHD1 332 aaPredicted RBP16.7■□□□□ 0.26
SHANK2-204ENST00000409530 KIAA0355O15063 1070 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 CILPO75339 1184 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
SHANK2-204ENST00000409530 VAV2P52735 878 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 PSMC1P62191 440 aaKnown RBP16.69■□□□□ 0.26
SHANK2-204ENST00000409530 FAM189BP81408 668 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 CDR2Q01850 454 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 MFSD5Q6N075 450 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 UBE2Q1Q7Z7E8 422 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 PHLDB2Q86SQ0 1253 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 ACOT1Q86TX2 421 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 C12orf29Q8N999 325 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 WHAMMQ8TF30 809 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 TFAP2BQ92481 460 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 PAXBP1Q9Y5B6 917 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 NME7Q9Y5B8 376 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 FNDC1Q4ZHG4 1894 aaPredicted RBP16.69■□□□□ 0.26
SHANK2-204ENST00000409530 A8MXQ7 604 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 NT5C1B-RDH14C9J2C7 533 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 CCP110O43303 1012 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 ZNF500O60304 480 aaPredicted RBP16.69■□□□□ 0.26
SHANK2-204ENST00000409530 RAD23BP54727 409 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 NAP1L1P55209 391 aaKnown RBP16.69■□□□□ 0.26
SHANK2-204ENST00000409530 WSCD1Q658N2 575 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 UBE2Q2Q8WVN8 375 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 CPA5Q8WXQ8 436 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 DDX1Q92499 740 aaKnown RBP16.69■□□□□ 0.26
SHANK2-204ENST00000409530 SENP8Q96LD8 212 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 HEXIM2Q96MH2 286 aaKnown RBP16.69■□□□□ 0.26
SHANK2-204ENST00000409530 ZSWIM1Q9BR11 485 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 SYT11Q9BT88 431 aa16.69■□□□□ 0.26
SHANK2-204ENST00000409530 BUB1O43683 1085 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 LMO2P25791 158 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 ZNF132P52740 706 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 PTPN14Q15678 1187 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 NAA35Q5VZE5 725 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 NPAS4Q8IUM7 802 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 PDCL2Q8N4E4 241 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 SLC4A11Q8NBS3 891 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 KBTBD7Q8WVZ9 684 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 CASD1Q96PB1 797 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 SNX25Q9H3E2 840 aa16.68■□□□□ 0.26
SHANK2-204ENST00000409530 BARX2Q9UMQ3 279 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-204ENST00000409530 LTBP2Q14767 1821 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 STAU1O95793 577 aaKnown RBP16.67■□□□□ 0.26
SHANK2-204ENST00000409530 ARHGAP25P42331 645 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 KIF5AQ12840 1032 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 TIGD5Q53EQ6 642 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 COL13A1Q5TAT6 717 aaPredicted RBP16.67■□□□□ 0.26
SHANK2-204ENST00000409530 ZNF606Q8WXB4 792 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 CYFIP2Q96F07 1278 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 TMEM176AQ96HP8 235 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 TSPAN18Q96SJ8 248 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 CYP3A43Q9HB55 503 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 TSC2P49815 1807 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 CCDC85CA6NKD9 419 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 RFC2P35250 354 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 BPIFB4P59827 614 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 PTPROQ16827 1216 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 OSTM1Q86WC4 334 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 NT5C1AQ9BXI3 368 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
SHANK2-204ENST00000409530 LCA5LO95447 670 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 WDR5P61964 334 aaKnown RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 SPOUT1Q5T280 376 aaKnown RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 C1orf131Q8NDD1 294 aaKnown RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 B3GALT6Q96L58 329 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 CNTN6Q9UQ52 1028 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 M0QYV0 167 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 ATP2C2O75185 946 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 MOCS3O95396 460 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 FTLP02792 175 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 TNNT1P13805 278 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 CCDC130P13994 396 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 RPL9P32969 192 aaKnown RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 GNL1P36915 607 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 GALCP54803 685 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 GNG11P61952 73 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 INCA1Q0VD86 236 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 SYT10Q6XYQ8 523 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 COLGALT2Q8IYK4 626 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 THAP2Q9H0W7 228 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 NRDE2Q9H7Z3 1164 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 LUC7LQ9NQ29 371 aaKnown RBP16.66■□□□□ 0.26
SHANK2-204ENST00000409530 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 PTPRSQ13332 1948 aa16.66■□□□□ 0.26
SHANK2-204ENST00000409530 PIK3R2O00459 728 aa16.65■□□□□ 0.26
SHANK2-204ENST00000409530 KRT86O43790 486 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms