RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 TARSL2A2RTX5 802 aaKnown RBP26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 AP1G2O75843 785 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 ZNF177Q13360 481 aaPredicted RBP26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 NR1I3Q14994 352 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 CLEC17AQ6ZS10 378 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 MRPS31Q92665 395 aaKnown RBP26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 DPF3Q92784 378 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 CXCL11O14625 94 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 VTNP04004 478 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 SPATA18Q8TC71 538 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 ATP11BQ9Y2G3 1177 aa26.22■■□□□ 1.79
SPIRE1-202ENST00000409402 RGS4P49798 205 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 IPMKQ8NFU5 416 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 OSBPL8Q9BZF1 889 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 ATN1P54259 1190 aaPredicted RBP26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 ACBD5Q5T8D3 534 aaPredicted RBP26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 RRM2BQ7LG56 351 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 OTUB1Q96FW1 271 aaPredicted RBP26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 DSEQ9UL01 958 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 CCDC78A2IDD5 438 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 KDM1AO60341 852 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 AMHR2Q16671 573 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 C1orf146Q5VVC0 180 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 C4orf22Q6V702 233 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 SRPK1Q96SB4 655 aaKnown RBP26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 CCDC22O60826 627 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 CTDNEP1O95476 244 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 FGFR2P21802 821 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 COBLL1Q53SF7 1204 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 ATP6V1G3Q96LB4 118 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 RBM15Q96T37 977 aaKnown RBP eCLIP26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 PKP3Q9Y446 797 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 SPDYE5A6NIY4 337 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 SPDYE7PQ495Y7 208 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 KIRREL3Q8IZU9 778 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 XAB2Q9HCS7 855 aaKnown RBP26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 SCOCQ9UIL1 159 aa26.21■■□□□ 1.79
SPIRE1-202ENST00000409402 ITSN1Q15811 1721 aa26.2■■□□□ 1.79
SPIRE1-202ENST00000409402 Q4G0T1 1027 aa26.2■■□□□ 1.79
SPIRE1-202ENST00000409402 ZC3H11AO75152 810 aaKnown RBP eCLIP26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 GUCY2CP25092 1073 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 WDCPQ9H6R7 721 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 RPSAP08865 295 aaKnown RBP26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 HERVK_113P62684 666 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 SFSWAPQ12872 951 aaKnown RBP26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 MAP1SQ66K74 1059 aaPredicted RBP26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 UCMAQ8WVF2 138 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 NEUROG2Q9H2A3 272 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 USP27XA6NNY8 438 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 CYB561D2O14569 222 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 COMTP21964 271 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 DSG3P32926 999 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 GRB10Q13322 594 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 SEZ6Q53EL9 994 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 METTL7BQ6UX53 244 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 GPC2Q8N158 579 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 AGR3Q8TD06 166 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 GPRC5CQ9NQ84 441 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 C20orf96Q9NUD7 363 aaPredicted RBP26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 KIAA1257Q9ULG3 409 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 NEU2Q9Y3R4 380 aa26.2■■□□□ 1.78
SPIRE1-202ENST00000409402 MED24O75448 989 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 GCKP35557 465 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 ARMC6Q6NXE6 501 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 TRABDQ9H4I3 376 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 SMAPO00193 183 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 RPL10AP62906 217 aaKnown RBP26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 C1orf131Q8NDD1 294 aaKnown RBP26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 GMNCA6NCL1 334 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 MBL2P11226 248 aaPredicted RBP26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 FBXO32Q969P5 355 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 LRRC14Q15048 493 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 CTXN3Q4LDR2 81 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 NAPEPLDQ6IQ20 393 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 KIF2CQ99661 725 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 SPATA16Q9BXB7 569 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 DDIT4Q9NX09 232 aa26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 CHCHD3Q9NX63 227 aaKnown RBP26.19■■□□□ 1.78
SPIRE1-202ENST00000409402 M0QYT0 321 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 ACO1P21399 889 aaKnown RBP26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 EPHB2P29323 1055 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 SMTNL2Q2TAL5 461 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 BOLA3Q53S33 107 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 SPDYAQ5MJ70 313 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 PKN3Q6P5Z2 889 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 CEP19Q96LK0 163 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 TNS2Q63HR2 1409 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 SALL1Q9NSC2 1324 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 CST8O60676 142 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 SUPT3HO75486 399 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 POLBP06746 335 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 THP07101 528 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 ABCE1P61221 599 aaKnown RBP26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 TMEM259Q4ZIN3 620 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 EPC2Q52LR7 807 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 ELOA2Q8IYF1 753 aaPredicted RBP26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 SYN2Q92777 582 aaPredicted RBP26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 KIAA1683Q9H0B3 1180 aa26.18■■□□□ 1.78
SPIRE1-202ENST00000409402 STX18Q9P2W9 335 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms