RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 BIRC3Q13489 604 aa19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 SLC39A12Q504Y0 691 aa19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 TOP6BLQ8N6T0 577 aa19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 TMC2Q8TDI7 906 aa19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 C1QTNF1Q9BXJ1 281 aa19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 ZCWPW1Q9H0M4 648 aa19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 HCFC1R1Q9NWW0 138 aa19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 DNMT3BQ9UBC3 853 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-206ENST00000409141 MUC3AQ02505 3323 aa19.27■□□□□ 0.68
PDLIM2-206ENST00000409141 MAPK13O15264 365 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 N4BP1O75113 896 aaKnown RBP19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 VNN2O95498 520 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 PTPN2P17706 415 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 DLG4P78352 724 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 CLDN10P78369 228 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 SOWAHAQ2M3V2 549 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 EDRF1Q3B7T1 1238 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 ZCWPW2Q504Y3 356 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 COBLL1Q53SF7 1204 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 CENPPQ6IPU0 288 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 GET4Q7L5D6 327 aaPredicted RBP19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 DPH6Q7L8W6 267 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 DCP1BQ8IZD4 617 aaKnown RBP19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 ELMOD1Q8N336 334 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 ATAD1Q8NBU5 361 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 MMS19Q96T76 1030 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 MAN1B1Q9UKM7 699 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 SLC27A5Q9Y2P5 690 aa19.27■□□□□ 0.67
PDLIM2-206ENST00000409141 MTMR11A4FU01 709 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 AKAP3O75969 853 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 PSMC2P35998 433 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 CDR1P51861 262 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 MYL7Q01449 175 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 TWF1Q12792 350 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 STIM1Q13586 685 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 PABPC1LQ4VXU2 614 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 LRRTM3Q86VH5 581 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 FAM186BQ8IYM0 893 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 ADGRF2Q8IZF7 708 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 ADSSL1Q8N142 457 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 IPO9Q96P70 1041 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 MYADMQ96S97 322 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 TSG101Q99816 390 aa19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 DDX43Q9NXZ2 648 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-206ENST00000409141 C4BPAP04003 597 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 KRT13P13646 458 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 ATICP31939 592 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 LHX1P48742 406 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 VAMP7P51809 220 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 MYL6P60660 151 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 TSPY1Q01534 308 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 PTPN21Q16825 1174 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 WDR72Q3MJ13 1102 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 TDRD10Q5VZ19 366 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 IQCEQ6IPM2 695 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 INTS8Q75QN2 995 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 SPATA18Q8TC71 538 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 EEF2KMTQ96G04 330 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 ZNF512Q96ME7 567 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 ACBD6Q9BR61 282 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 CORO1BQ9BR76 489 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 CRISPLD1Q9H336 500 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 YIPF1Q9Y548 306 aa19.25■□□□□ 0.67
PDLIM2-206ENST00000409141 IKBKBO14920 756 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 CETN3O15182 167 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 CLSTN1O94985 981 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 ASGR2P07307 311 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 RHOP08100 348 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 ACAT1P24752 427 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 ALDH1A3P47895 512 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 SMARCB1Q12824 385 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 PLD1Q13393 1074 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 ANKRD40Q6AI12 368 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 SYAP1Q96A49 352 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 CEP72Q9P209 647 aa19.24■□□□□ 0.67
PDLIM2-206ENST00000409141 BIN1O00499 593 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 GABRDO14764 452 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 PSMA7O14818 248 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 LAMP2P13473 410 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 TUFMP49411 452 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 EPHB3P54753 998 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 TNNC1P63316 161 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 NCOA4Q13772 614 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 CAMK4Q16566 473 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 LIMS2Q7Z4I7 341 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 OSTM1Q86WC4 334 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 ITFG1Q8TB96 612 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 C2orf15Q8WU43 125 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 EDAQ92838 391 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 EPS15L1Q9UBC2 864 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 HSFX1Q9UBD0 423 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 NXF1Q9UBU9 619 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 CDH7Q9ULB5 785 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 MRPS23Q9Y3D9 190 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 DENND4AQ7Z401 1863 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 DOCK6Q96HP0 2047 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 TSC2P49815 1807 aa19.23■□□□□ 0.67
PDLIM2-206ENST00000409141 VNN1O95497 513 aa19.22■□□□□ 0.67
PDLIM2-206ENST00000409141 STAU1O95793 577 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms