RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TEX35Q5T0J7 233 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 CWF19L1Q69YN2 538 aaKnown RBP10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 PDXDC1Q6P996 788 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 PARM1Q6UWI2 310 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 CYP26C1Q6V0L0 522 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 HSCBQ8IWL3 235 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 ING5Q8WYH8 240 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 TATDN2Q93075 761 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 SAAL1Q96ER3 474 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 MRPL44Q9H9J2 332 aaKnown RBP10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 RPF1Q9H9Y2 349 aaKnown RBP10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 DUSP12Q9UNI6 340 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 ARIH1Q9Y4X5 557 aaPredicted RBP10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 STYXL1Q9Y6J8 313 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 NUMBLQ9Y6R0 609 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 MYH15Q9Y2K3 1946 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 M0QZQ0 153 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 PI15O43692 258 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 GCNT3O95395 438 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 HNRNPA1P09651 372 aaKnown RBP eCLIP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 ZSCAN22P10073 491 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 AVPR2P30518 371 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 AARSP49588 968 aaKnown RBP eCLIP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 HTR4Q13639 388 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CTXN3Q4LDR2 81 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 SPATA1Q5VX52 437 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 RNF19BQ6ZMZ0 732 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CCDC73Q6ZRK6 1079 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CLEC17AQ6ZS10 378 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 FMNL3Q8IVF7 1028 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 EFCAB13Q8IY85 973 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 SLC44A3Q8N4M1 653 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 ZNF461Q8TAF7 563 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 FGF13Q92913 245 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 TCEAL4Q96EI5 215 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 PGLYRP2Q96PD5 576 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 TMEM209Q96SK2 561 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CYP4F11Q9HBI6 524 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 AGO2Q9UKV8 859 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 UBQLN1Q9UMX0 589 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 KRBA1A5PL33 1030 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 ANHXE9PGG2 379 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 PPFIA2O75334 1257 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 PRPF6O94906 941 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 F13A1P00488 732 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CEBPBP17676 345 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CYP3A5P20815 502 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 HOXA9P31269 272 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CCR2P41597 374 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 LILRA4P59901 499 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 TMEM132DQ14C87 1099 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 PABPC1LQ4VXU2 614 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 C9orf57Q5W0N0 161 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 MMS22LQ6ZRQ5 1243 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 NPAS3Q8IXF0 933 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 C10orf67Q8IYJ2 551 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 SIX5Q8N196 739 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 IQUBQ8NA54 791 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 FLCNQ8NFG4 579 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 SNRNP27Q8WVK2 155 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 POMGNT1Q8WZA1 660 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CBWD1Q9BRT8 395 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 PANK4Q9NVE7 773 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 FAM86C1Q9NVL1 165 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 ZNF446Q9NWS9 450 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 IGSF9Q9P2J2 1179 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 CA14Q9ULX7 337 aa10.44□□□□□ -0.74
NIF3L1-202ENST00000409020 ANK1P16157 1881 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 ARHGEF37A1IGU5 675 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 GOLGA8IPA6NC78 632 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 GOLGA8JA6NMD2 632 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 PIRO00625 290 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 PPP6R2O75170 966 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 CPP00450 1065 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 RHOP08100 348 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 ATF2P15336 505 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 GAP43P17677 238 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 HOXD13P35453 343 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 DNM1Q05193 864 aaKnown RBP10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 ADCY1Q08828 1119 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 AP1ARQ63HQ0 302 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 ZNF280DQ6N043 979 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 SYT10Q6XYQ8 523 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 SRLQ86TD4 932 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 TTC9BQ8N6N2 239 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 GPR152Q8TDT2 470 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 TSC1Q92574 1164 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 DHX58Q96C10 678 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 FAM213AQ9BRX8 229 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 PCIF1Q9H4Z3 704 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 OLFML3Q9NRN5 406 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 CEP72Q9P209 647 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 CDH7Q9ULB5 785 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 INSL5Q9Y5Q6 135 aa10.43□□□□□ -0.74
NIF3L1-202ENST00000409020 TSC2P49815 1807 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 ANO9A1A5B4 782 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms