RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CNNM4Q6P4Q7 775 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 LRRTM3Q86VH5 581 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 TMC8Q8IU68 726 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 GPD1LQ8N335 351 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 CXorf38Q8TB03 319 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 ZCWPW1Q9H0M4 648 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 BLZF1Q9H2G9 400 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 AGAP1Q9UPQ3 857 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 ALDH1A3P47895 512 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 EPHB3P54753 998 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 STARD6P59095 220 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 PLD1Q13393 1074 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 TEAD2Q15562 447 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 SLC44A4Q53GD3 710 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 ATL3Q6DD88 541 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 STXBP4Q6ZWJ1 553 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 EPM2AIP1Q7L775 607 aaPredicted RBP20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 METTL23Q86XA0 190 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 LEMD2Q8NC56 503 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 SHKBP1Q8TBC3 707 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 ELSPBP1Q96BH3 223 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 CHAMP1Q96JM3 812 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 ASB16Q96NS5 453 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 CFAP45Q9UL16 551 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 SIT1Q9Y3P8 196 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 CACNA1IQ9P0X4 2223 aa20.8■□□□□ 0.92
SMARCB1-204ENST00000407422 PTPRJQ12913 1337 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 FAM26FQ5R3K3 315 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 LMBRD2Q68DH5 695 aaPredicted RBP20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 CBWD2Q8IUF1 395 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 THEM5Q8N1Q8 247 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 CSGALNACT2Q8N6G5 542 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 CACTINQ8WUQ7 758 aaKnown RBP20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 ZNF560Q96MR9 790 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 MTMR12Q9C0I1 747 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 ZFP14Q9HCL3 533 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 FAM13BQ9NYF5 915 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 RCOR1Q9UKL0 485 aa20.79■□□□□ 0.92
SMARCB1-204ENST00000407422 A0A1W2PRU2 124 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 EIF3DO15371 548 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 LRRN2O75325 713 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 GLULP15104 373 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 EHHADHQ08426 723 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 GRM2Q14416 872 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 MLF2Q15773 248 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 DNAJB7Q7Z6W7 309 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 PJA1Q8NG27 643 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 ZNF507Q8TCN5 953 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 SMARCD2Q92925 531 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 SEPT5Q99719 369 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 MAGEF1Q9HAY2 307 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 ZNF334Q9HCZ1 680 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 HSPBP1Q9NZL4 362 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 DLGAP2Q9P1A6 1054 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 SIX4Q9UIU6 781 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 RIF1Q5UIP0 2472 aaKnown RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 F5P12259 2224 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 TGFB1I1O43294 461 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 CD72P21854 359 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 PNPLA4P41247 253 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 VIPR2P41587 438 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 AFMP43652 599 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 PFKPQ01813 784 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 CUL4BQ13620 913 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 ANGPT1Q15389 498 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 UNC13DQ70J99 1090 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 GRAMD1CQ8IYS0 662 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 PDCL2Q8N4E4 241 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 OR5B17Q8NGF7 314 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 ZSCAN18Q8TBC5 510 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 SHDQ96IW2 340 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 LPIN3Q9BQK8 851 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 DDX23Q9BUQ8 820 aaKnown RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 ITGA11Q9UKX5 1188 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 ZDHHC9Q9Y397 364 aa20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 MTF2Q9Y483 593 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-204ENST00000407422 FRYLO94915 3013 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 NCANO14594 1321 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 ZNF233A6NK53 670 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 KRT19P08727 400 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 BFSP1Q12934 665 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 MGAT5BQ3V5L5 792 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 STXBP5Q5T5C0 1151 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 GAREM2Q75VX8 874 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 NELFCDQ8IXH7 590 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 SCFD1Q8WVM8 642 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 PSMG2Q969U7 264 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 SLITRK6Q9H5Y7 841 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 TMLHEQ9NVH6 421 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 HSFX1Q9UBD0 423 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 L1RE1Q9UN81 338 aa20.77■□□□□ 0.92
SMARCB1-204ENST00000407422 TICRRQ7Z2Z1 1910 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 KANSL1LA0AUZ9 987 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 KIAA0391O15091 583 aaKnown RBP20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 TMEM191BP0C7N4 346 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 ATF6P18850 670 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 PRKCQQ04759 706 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 VITQ6UXI7 678 aa20.76■□□□□ 0.91
SMARCB1-204ENST00000407422 GPIHBP1Q8IV16 184 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms